Lysobacter antibioticus ATCC 29479: GLA29479_2667
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Entry
GLA29479_2667 CDS
T04526
Name
(GenBank) RHS Repeat family protein
KO
K20276
large repetitive protein
Organism
laq
Lysobacter antibioticus ATCC 29479
Pathway
laq02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
laq00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GLA29479_2667
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF6443
DUF6531
Motif
Other DBs
NCBI-ProteinID:
ALN63533
LinkDB
All DBs
Position
complement(2906049..2914328)
Genome browser
AA seq
2759 aa
AA seq
DB search
MASPSGTSAPSIRTFQMDASSVGVLKNSVNLFRGDVNYTQDLFSLPGRSNNDGLQIQLTM
QYQSNVNQQAMTWNRDQPTGVLGMGWTLPLAQIRMDDGNCPTPGQRSYTLSVSGNASAIV
FDPTAPPLFSMDPTLASQLQDGQAVPAAIRNEFVSRGLPLSATAVVVVDGSATWTLQDDA
LEQEFALSLGDTLVAADGGEAYQLASYRFWKVLYYPRYERWCVTNDSGQRMSFGGGVAAT
DAGYATSAGDSIEWGVQWTDANGRALWQGNSSLAQGQRQFARAWHLQRVYSIFGESVTYA
YNCFERTAAGLLDQVEQLVAEGGKPYTKACYLGRINDVFGRSVVFNYGQKLWSDATPSSP
REYDDPHKAIPNTDPNGFQDCYETLYLASIDVLQPSGAPLFAVEFEYQPLPASPVANVAG
ASGDTCKRLLTSMTLSNADGDSLPGYRYGYVLDGGTDDNLGALNRIVWPSGGSATYQYTQ
QALAICDRTLPAGPPTQMPNGSNARVWFGPDYAVVLWCNDGQGSLSMQVYTWNGQWTVWP
PEGNSPLLLDGSQGQTASNLLSVQASQDFIAVSYLTSTTTNLHLFRQDMASPGRWIAASG
GQGSGGLNSPTWSWNNSNGSVQILAGDSFAFAVQSNPAKLTCDTVRFSWYWPGQNWNYQQ
QSGLSYRWFASGHDYVASLDIGANVNLDWLDASGQWHSATPLALGFSIASTDSIALAGDA
SLLAISHLLVAGTNRNNYDLWLVQWNDQYQFAQPATKFSCTDNFSAQHPTSWAPTSVANS
MVCVAANVARFDGASWSIDSAMVPVGTTNAEQRYGYGPDYVVQVLVQSNGMPSAQVLGYD
PTADAFGTPTSVSGLSIPNSHAATANWVGAGSPDYLAIGTQLFFRGVATDWGDAVATSIA
DLQTLIDTAAPGQGPYVLNSASLLNQGPTFIACSLYDQGVPGGTASATSAFVLRNGAVFG
GAQVLGEQAMWTAQQPGQGAGTWPGGPMAFFTYPGSAGSLDAATSVNLNRYAGNGILGPI
QDWPVGSIALDDGLSESSTTAYVFDASSAACDATGSIVKYYQSTVYPDGSAQDNANGSVV
SRYLNGNQIVTGDDWYGMLDGLLYSVTAIDANGSEVGSITNQWTAYVQRAGDPTDPGVPV
RTLYGAYVVQTAQQKLADGVASSRTTSYVPAGLSAPYSGQPVSVQSTVVDGSGNSEVDTI
DYRYACDAYAVSCTLNDLTSKIEQRTTQAGVTTSVSAMALSSWPTLWDEVSTLAEAADFG
WTAGSDAFAFADWTPGQIPAGWQPLSLIQTRAADGTVLQNADGAGVTCATTYSANGSGLP
IAAFRGAVAGECAWCGFQTYESTDGWQLSGTQPDPQQAWLGEQSLSLAVAGSVSTAVTPS
AGRTAYRFALRYLTASGYDGGSGAITVTAGATSSSFDLPDTQGEWSYLSDIVALPQGCDS
VGLSIANPGNGAVLLDGVLLIPVGCDVTVQSWQASTRLLLASMNLAGACDFIRYDRFAQT
LGAVGADGQWQELDLRFLSRLGNAEDVFDDASPNCELTLQFAQGGNTETFRNGNDWQTRW
APSDAADWQCGNGTLLKQNATPATLTWQGGNPPDSVAFFIELKPLAAPAGTLALQFGDGE
RIAWSTASGWSWTLADGSAGPAPLASAPGLGRQWLLLLGGGQTLFFVDGQVVFSAAAATT
PAQGFAFDTGPNALRISQLGFGGDPRTLLSYNDGAARLRQTQQRNGGDSLVAASVYDGLD
RLLAGTKAAPGSFGSGAQAPMLTYRPAFLDVAAFLAATSDSWLMQGDVADYYAGQSDDGG
MRSNDQGYPYYGSRYEAAATSRAVEGGQPGLQLAIHDILSVPESQRQTIRTAYGASTATD
PVAPGSFYATTSLSPGGYSARQLVDTSQRATAMVQSGQSGQQAGQSLALPGYADAGAAAT
TISLQLPNAFTATPQSDPSAYVRTTVVDPLGQVASYQDSDTGQTQVLYNGKGQLRFVQPA
LDSGQQYLLYRRYDALGRVLEEGVLEAAWDPAALNPYLDDPNWPAAADGAVPGRVYRYDG
DGSDPNALGQLVETTTYNPDPGDGLGACTVVESWSYDGLGRAITARLQIDGAATQDATVG
FAYNNLNEVVRIDLPDGAPLPAIVYVYDDLGRIVSIGTPQAPDAIARYTWTANGQLQTAV
RGALSELWNYDSPGCVTLHQASVGGAVAFAQSFSYTPDRLVQQRTTQLATAIATGTRQSN
YVYDDQQRLATATVVSGDTGNLSIDSIDANGNIWASTADGVTLSTPCSPGNNRLATATFG
SGPASTFEYHADGAPSQWRGLDIGYDPCLFSTATVASPGFDTIRYARGMNNHCALRQQGD
TRRIYFYGAGSAPLMVWNGDALQVCVWGPGGLVAVHDGALRYPVNDYQQSVWAVFDDAGN
AQNAFDYAPFGAVLSSAGPGDWNLLFAGKQYDSDSGLYDFGARLYDPSLMRFLAPDSARQ
FASPYLFASDNPLNYVDPTGNISLWAQVGIGVAMVAVAVGGLALSVVTDGAAAPEAIDAE
IDLAGAGGATDVAAGAGADAVDASVPLKTATAVARNALSVVINSASSAISGAGMQGLEYD
ALHGRDFTAKGFFSAMGVGALSGAVTGGFNGLASMPAAMGDAAAWGTAKTIAFRTLTRAA
TGFVGSAVSEVITDAVTGKKITASDVLLSAAEGMVEGAAVSMYNGFTSLSPADSAITSES
SRLVKASNSWNNLLQSAQKLATTQEAVVGYIAGGWLLASGYAVWGVATATKGRGQSGGG
NT seq
8280 nt
NT seq
+upstream
nt +downstream
nt
atggccagtccgtccggcaccagcgcaccgagcatccgcaccttccagatggacgccagc
agcgtcggcgtgctcaagaacagcgtcaacctgtttcgcggcgacgtgaactacacccag
gacctgttctcgctgccggggcgcagcaacaacgacggcctgcagatccagctgacgatg
cagtaccagagcaacgtcaatcagcaggcgatgacctggaaccgcgaccagcccaccggc
gtgctcggcatgggctggacgctgccgctggcgcagatccgcatggacgacggcaactgc
cccacgcccggccagcgcagctacaccttgtcggtgagcggcaacgccagcgcgatcgtg
ttcgacccgaccgcgccgccgttgttctccatggacccgaccttggcctcccagcttcag
gacggccaagccgtgccggcggcgatccgcaacgagttcgtctcgcgcggattgcctcta
tccgccacggccgtggtggtcgtcgacggcagcgctacctggaccttgcaggacgatgcg
ctggagcaggagttcgcactcagcctcggcgatacgctggtcgccgccgacggcggcgag
gcctatcagctggccagctaccgattctggaaggtgctgtattacccgcgttacgagcgc
tggtgtgtcaccaacgattcgggccagcgcatgtcgttcggcggcggcgtcgccgcgacc
gacgccggctacgcgaccagcgccggcgacagcatcgaatggggcgtgcagtggaccgac
gccaacggtcgtgcgctgtggcagggcaacagcagcctcgcccaaggccagcgccagttc
gcccgcgcctggcacctgcaacgcgtctacagcatcttcggcgagtcggtgacctacgcg
tacaactgtttcgagcgcactgccgcgggcttgctcgaccaggtcgaacagctcgtggcc
gagggcggcaagccctacaccaaggcctgctacctgggccgcatcaacgacgtgttcggc
cgcagcgtggtgttcaactacgggcagaaactgtggagcgatgccacgccttccagtccg
cgcgagtacgacgacccgcacaaggccatccccaataccgaccctaacggtttccaggac
tgctacgagaccttgtatctggcgtccatcgacgtgttgcagccgagcggcgcgccgttg
ttcgcggtcgagttcgagtaccagcccctgcccgcctcgccggtggccaacgtcgccggc
gcctccggagatacctgcaagcgcctgctcacttcgatgacgctcagcaacgccgacggc
gactccttgccgggctatcgctacggctacgtgctcgatggcggaacggacgacaatctc
ggcgcgctcaaccgcatcgtctggcccagcggcggcagcgcgacctaccagtacacccag
caagcgttggcgatctgcgaccgcaccctgcccgcgggcccgccgacgcagatgccgaac
ggctccaacgcgcgggtttggttcggccccgactacgctgtggtgctgtggtgcaacgac
ggccagggcagtctgtcgatgcaggtctacacctggaacggccaatggacggtgtggccg
ccggagggcaactcgccgctgttgctcgacggcagccagggccagaccgcctcgaaccta
ttgtcggtgcaggcgagccaggacttcatcgccgtttcgtatctgaccagcaccaccacc
aacctgcatttgttccgccaggacatggcgagccccggccgctggatcgccgcttcgggc
ggccagggctcgggcggcctcaactcgccgacctggagctggaacaacagcaacggcagc
gtgcagatcctggccggcgactccttcgccttcgcggtgcagtccaaccccgccaaactg
acctgcgatacggtgaggttcagctggtactggccggggcagaactggaactaccagcag
caatccggcttgagctaccgctggttcgccagcggccacgactacgtcgccagcctggat
atcggcgccaacgtcaatctggattggctcgacgccagcggccagtggcactcggcaacg
ccgctggcactcggcttctccatcgcgagcaccgattcgatcgcgctggccggcgacgcc
tccctgctggcgatctcgcatctgctggtcgccggcaccaaccgcaacaactacgacctg
tggctggtgcaatggaacgaccaataccagttcgcccagccggccacgaagttctcgtgc
acggataatttttccgcgcagcacccgacctcgtgggcgccgaccagcgtcgccaattcg
atggtatgcgtggccgcgaacgtggcccgcttcgacggcgccagctggtcgatcgacagc
gcgatggtgccggtgggtaccaccaacgccgaacagcgttacggctacggccccgactac
gtcgtgcaggtgttggtgcagagcaatggcatgccctcggcgcaggtgctcggctacgac
cccaccgccgacgccttcggcacgcccaccagcgtgagcggactcagcattccgaacagc
catgccgcgaccgccaactgggtcggcgccggcagtccggactatctggcgatcggcacc
cagctgttcttccgcggcgtcgccaccgattggggcgacgccgtcgccaccagcatcgcc
gacctgcaaaccctgatcgacaccgcggcgccgggccagggcccgtacgtgctcaattcg
gcctcgctgctcaaccaggggccgaccttcatcgcctgctcgctctacgaccagggtgtt
cccggcggcaccgcaagcgccacctcggccttcgtgctgcgcaacggcgcagtattcggc
ggtgcccaggtgctcggcgaacaggcgatgtggaccgcgcagcaaccgggccagggcgcc
ggcacctggcccggcgggccgatggcgttcttcacctatccgggcagcgccggcagcctc
gacgccgccaccagcgtcaatctcaatcgctatgccggcaacggcattctcggcccgatc
caggattggccggtcggcagcatcgccctcgacgacggcctgtccgagtcttcgaccacg
gcctatgtgttcgatgcgagcagcgccgcctgcgacgccaccggcagcatcgtcaagtac
taccagtccacggtctatcccgatggcagcgcacaagacaacgccaatggctcggtggtc
agccgctatttgaacggcaaccagatcgtcaccggcgacgattggtacggcatgctcgat
ggcctgctctacagcgtgaccgcgatcgatgcgaacggcagcgaggtcggctcgatcacc
aatcaatggaccgcctatgtgcagcgagccggcgacccgaccgatccaggcgtgccggtg
cgaacgctgtacggcgcctacgtggtgcagaccgcgcagcagaaactggccgacggcgtg
gcctccagccgaaccacgtcctacgtgcccgcggggctgtccgcgccgtattccggccaa
ccggtcagcgtccagtccaccgtcgtcgacggctccggcaacagcgaggtcgacaccatc
gactaccgctatgcctgcgatgcctatgcggtcagctgcacgctcaacgatctgacctcc
aagatcgaacaacgcaccactcaggcgggcgtcaccacctcggtctcggcgatggcgctg
tcgagctggccgacgctgtgggacgaggtgagcacgctcgccgaagccgccgatttcggc
tggaccgccggcagcgatgcgtttgcgttcgccgattggacgccgggacagataccggcg
ggttggcagccgctgagcctgatccagacgcgcgcggccgacggcacggtgctgcagaac
gccgacggcgcaggcgtcacctgcgctaccacctattccgccaacggcagcggcctgccg
atcgccgcgttccgcggcgccgtcgccggcgagtgcgcctggtgcggcttccagacctac
gaaagcaccgatggctggcagttgagcggcacccagcccgatccgcaacaagcctggctc
ggcgaacaaagcttgtcgctcgcggtcgccggcagcgtctccaccgcggtgacgccgagt
gcaggccgaaccgcgtaccggttcgcgctgcgctatctgaccgcatccggctacgacgga
ggcagcggcgcgatcaccgtcaccgcgggcgcgacttcgtcttccttcgatttgcccgac
acccagggcgagtggagctatctcagcgacatcgtcgctctgccgcagggctgcgacagc
gtcggcctgtccatcgccaacccgggcaacggcgcggtgctgctcgacggcgtgctgctg
attccggtgggctgcgatgtcaccgtgcaatcctggcaggcctccacgcgattgttgctg
gcgagcatgaacctcgccggcgcctgcgatttcatccgttatgaccgcttcgcccagacc
ctcggcgcggtcggtgccgacggccaatggcaggaattggacctgcgtttcctgtcgcgc
ctgggcaatgccgaagacgttttcgacgacgccagccccaactgcgagctcaccttgcag
ttcgcccagggcggcaacaccgaaaccttccgcaacggcaacgattggcagacccgctgg
gcgccgagcgatgcggccgactggcagtgcggcaacggcaccctgctgaaacagaacgcc
acgcccgcgaccctgacctggcagggcggaaacccgcccgactcggtcgcattcttcatc
gagctcaagcccctggccgcgcccgccggcaccctggcgctgcaattcggcgacggcgaa
cgcatcgcctggagcaccgcctcgggctggtcctggacgctcgccgacggcagcgccggg
cccgcgccgctggcatcggcgccgggcctgggcaggcaatggttgctgctgctcggcggc
ggccaaacgctgttcttcgtcgacggccaagtggtgttcagcgcggccgccgccaccacg
cccgcgcaagggttcgctttcgacaccggccccaacgcgctgcgcatcagccaactcggg
ttcggcggcgatccgcgcacgctgctgtcgtacaacgacggcgccgcgcggctgcgccag
acccagcagcgcaacggcggcgacagtctggtcgccgcctcggtgtacgacgggctggac
cgtctgctcgccggcaccaaggcagcgccgggcagcttcggcagcggcgcgcaggcgccg
atgctgacctatcgccccgccttcctggatgtcgcggccttccttgcagcaacctcggac
agttggctcatgcaaggcgacgtcgccgattactacgcagggcaaagcgacgacggcggc
atgcgctcgaacgatcaaggctatccgtactacggctcgcgctacgaagcggcggcgacc
tcgcgcgcggtcgaaggcggccagccgggattgcaactggccatccacgacatcctcagc
gtgcccgaatcgcagcgccagaccatacgcaccgcctacggcgccagcaccgcgaccgat
ccggtagcgccgggcagcttctacgcgaccaccagcctctcgcccggcggatacagcgcg
cggcaactggtggacaccagccagcgcgcgaccgcgatggtgcaatcggggcaatcgggc
caacaggcgggacagagcctggccttgcccggctatgccgatgccggtgccgcggccacg
acgatctcgctgcaactgccgaacgcattcaccgcgacgccgcaatcggacccgagcgcg
tatgtgcgcaccaccgtggtcgacccgctcggacaagtggccagctatcaggattccgac
accggccagacccaggtgctctacaacggcaagggccagctgcgcttcgtccagcccgca
ctcgattcgggccaacagtacttgctgtatcgccgctacgacgcgctcggccgcgtgctc
gaagaaggcgtgctcgaagcggcgtgggacccggccgcgttgaacccctacctcgatgac
cccaactggcccgccgcggccgacggtgccgtgcccggacgcgtctatcgttatgacggc
gatggcagcgaccccaatgcactcgggcagttggtcgaaacgaccacctacaacccggat
cccggcgacggcctcggcgcctgcaccgtggtcgagtcctggagctacgacgggctcggt
cgcgcaatcaccgcgcgtttgcagatcgacggcgccgcgacacaggatgcgacggtaggc
ttcgcctacaacaacctcaacgaagtggtgcgcatcgacctgcccgacggcgcgccgctg
ccggccatcgtctacgtctacgacgacctcggccgcatcgtttcgatcggcacaccgcag
gcgcccgatgccatcgcccgctacacctggaccgccaacggccagttgcagacggcggtc
cgcggcgcgctgtcggaactgtggaactacgattcgcccggctgcgtgaccttgcaccag
gccagcgtcggcggcgcggtcgcattcgcgcaatccttcagctacacccccgaccgcctg
gtgcaacaacgcaccacccagctggccaccgcgatcgccacgggcacgcgccagagcaac
tacgtctacgacgatcagcaacgcctggcgacggccacggtggtgtcgggcgataccggc
aacctgagcatcgacagcatcgatgcgaacggcaatatctgggcctccaccgccgacggt
gtcacgctgtcgacaccgtgcagccccggcaacaaccggttggctacggcgactttcggc
agcggccccgcttcgaccttcgaataccacgccgacggcgcgccctcgcaatggcgcggc
ctggacatcggctacgacccctgtttgttctcgaccgcgaccgtcgcctcgccgggcttc
gacaccatccgttacgcacgcggcatgaacaaccactgcgcgctgcggcagcaaggcgac
acgcgccggatctatttctacggcgccggctcggccccgctcatggtctggaacggcgac
gcattgcaagtctgcgtctgggggccgggcgggctggtcgcggtgcacgacggcgccctg
cgctatccggtcaacgattatcagcaaagcgtctgggcggtattcgacgacgccggcaat
gcacagaacgcgttcgactacgcgccgttcggcgcggtgttgtcgagcgccggtccgggc
gactggaacctgttgttcgccggcaagcaatacgactccgacagcggtctctacgacttc
ggcgcgcgcctgtacgacccgtcgctgatgcgtttcctcgccccggactcggcgcgccag
ttcgccagcccctatctgttcgccagcgacaacccactcaactacgtcgacccgaccggc
aacatctcgttgtgggcccaagtcggcatcggcgtggccatggtcgccgtcgccgtgggc
ggactggcgctcagcgtggtgaccgacggcgccgccgcgccggaggccatcgatgccgag
atcgacctggccggcgcaggtggcgccaccgatgtcgccgccggcgccggcgccgatgcc
gtcgatgcctcggttccgctcaagaccgctaccgcggtggcccgcaacgcgctcagcgtg
gtgatcaattccgcttccagcgccatctccggcgcgggcatgcaggggctggagtacgac
gccctgcacgggcgcgacttcaccgccaagggcttcttctcggcgatgggcgtcggcgcg
ctcagcggcgcggtgaccggcggattcaacggtctggcgtcgatgccggcggcgatgggc
gatgccgccgcttggggcacggccaagacgatcgcgttccgcaccctgacccgcgccgcg
accggcttcgtcggctcggcggtttcggaggtgatcaccgatgccgtcaccggcaagaag
atcactgcgagcgacgtgctgctgagcgcggccgagggcatggtcgaaggcgccgcggtg
agcatgtacaacggcttcaccagtctcagccccgccgacagcgcgatcaccagcgagtcg
agccggctggtgaaggccagcaactcctggaacaacctgctgcagagcgcgcagaaactc
gccaccacgcaagaggccgtggtcggctacatcgccggcggctggctgttggcatcgggg
tacgcggtgtggggtgtcgccaccgccaccaagggccgcggccaatcgggcggcggctga
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integrated database retrieval system
