Lysobacter antibioticus ATCC 29479: GLA29479_3270
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Entry
GLA29479_3270 CDS
T04526
Name
(GenBank) short chain dehydrogenase family protein
KO
K08679
UDP-glucuronate 4-epimerase [EC:
5.1.3.6
]
Organism
laq
Lysobacter antibioticus ATCC 29479
Pathway
laq00053
Ascorbate and aldarate metabolism
laq00520
Amino sugar and nucleotide sugar metabolism
laq01100
Metabolic pathways
laq01240
Biosynthesis of cofactors
laq01250
Biosynthesis of nucleotide sugars
Module
laq_M00999
UDP-GlcA/GalA biosynthesis, UDP-Glc => UDP-GlcA => UDP-GalA
Brite
KEGG Orthology (KO) [BR:
laq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00053 Ascorbate and aldarate metabolism
GLA29479_3270
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
GLA29479_3270
Enzymes [BR:
laq01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.6 UDP-glucuronate 4-epimerase
GLA29479_3270
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
KR
adh_short
NAD_binding_10
adh_short_C2
NmrA
Motif
Other DBs
NCBI-ProteinID:
ALN64124
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Position
3579384..3580349
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AA seq
321 aa
AA seq
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MTILVTGAAGFIGAYVCRALRAQGQAVVGLDNYNDYYDPQLKRDRVAALCPDVDIRAIDL
GDRDGLAALFDEVRPERVIHLAAQAGVRYSLTHPHAYVDSNLAGFVNLLELCRHRDVRHL
VYASSSSVYGDSATPPFSEDQRIDQPRSLYAATKAANELMAHTYAHLYGLHATGLRFFTV
YGPWGRPDMAPLLFSRAVLVGSPIEVFNHGKMRRDFTYIDDIVAGVLGALAHPSEQDPPH
RVFNLGNHTPVELERFIAVIEEAAGRNAEKVYKPMQPGDMIETMADTRRAQAAFGFKPST
AIELGLPRVVDWCRSYFGDRA
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcctcgtcaccggcgcagccggcttcatcggcgcctacgtctgccgcgccctg
cgcgcgcaaggccaggcggtggtcggcctcgacaactacaacgactactacgacccgcaa
ctcaagcgcgaccgcgtcgccgcgctgtgcccggacgtcgatatccgcgcgatcgacctc
ggcgatcgcgacggcctggccgcgctgttcgacgaggtccggcccgagcgcgtgatccat
ctcgccgcccaggccggcgtgcgttactcgttgacccatccgcacgcttacgtcgacagc
aacctggccggcttcgtcaatctgctcgagctgtgccggcaccgcgacgtgcgccatctg
gtctacgccagctcctcctcggtgtacggcgattcggcgacgccgccgttctccgaagac
cagcgcatcgaccagccgcgctcgctgtacgcggcgaccaaggccgccaacgagttgatg
gcgcatacctacgcccacctgtacggcctgcacgcgaccggcctgcgcttcttcaccgtc
tacggcccttggggccgccccgacatggcgccgttgctgttctcgcgcgcggtcctggtc
gggagcccgatcgaggtgttcaaccacggcaagatgcgccgcgacttcacctacatcgac
gacatcgtcgccggcgtactcggcgcgctcgcacacccctccgagcaggacccgccgcat
cgggtgttcaatctgggcaaccacaccccggtcgaactcgaacgcttcatcgcggttatc
gaggaagccgccggccgcaacgccgagaaggtctacaagccgatgcagccgggtgacatg
atcgaaaccatggccgacacccgccgcgcccaggcggcgttcggcttcaagccgagcacc
gcgatcgagctcggcctgccgcgggtggtcgactggtgccgcagctatttcggcgaccgc
gcctga
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