Lysobacter antibioticus ATCC 29479: GLA29479_3909
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Entry
GLA29479_3909 CDS
T04526
Name
(GenBank) hhH-GPD superbase excision DNA repair family protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
laq
Lysobacter antibioticus ATCC 29479
Pathway
laq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
laq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GLA29479_3909
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
laq03400
]
GLA29479_3909
Enzymes [BR:
laq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
GLA29479_3909
DNA repair and recombination proteins [BR:
laq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GLA29479_3909
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
ALN64760
UniProt:
A0A0S2FDY9
LinkDB
All DBs
Position
complement(4247590..4248279)
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AA seq
229 aa
AA seq
DB search
MPRHVRGFDAEAAHAYLSKRDRKLGAWMKKVDRLENGPIPTDPRWRQRFDPVDALARAIL
FQQLSGKAASTIVGRVEAAIGSGRLHYDTLGRCDDAALRACGVSGNKLLALRDLSARESR
GEIPDLRRMATMDNDAIIAALVPIRGIGRWTVEMMLMFRLGRPDILPVDDLGIRKGAQRV
DKLDEMPPPKALAELGERWGPYRSYASLYLWRIADFSEVAKPRTNRSQD
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgacatgtccgggggttcgacgccgaggccgcgcacgcttatctgagcaagcgc
gaccgcaagctcggcgcatggatgaagaaggtcgaccggctggagaacggcccgattccg
accgatccgcgctggcgccagcgcttcgatccggtcgatgcgctggcgcgggcgatcctg
ttccagcagctcagcggcaaggccgcctcgaccatcgtcggccgggtcgaagcggcgatc
ggcagcggccgcctgcattacgacaccctcggccgttgcgacgacgcggcgctgcgcgcc
tgcggcgtatccggcaataagctgctcgcgctgcgcgatctgtcggcgcgcgaatcgcgc
ggcgaaatcccggacctgcggcgcatggcgacgatggacaacgacgccatcatcgccgcg
ctcgtgccgatccgcggcatcggccgctggacggtcgagatgatgctgatgttccgcctg
ggccgccccgacatcctgccggtcgacgatctgggcatccgcaagggcgcacagcgcgtc
gacaagctcgacgagatgccgccgccgaaggccttggccgaactcggcgagcgctggggg
ccgtaccgcagctatgccagcctgtatctgtggcggatcgcggatttttccgaggtcgcc
aagcccaggaccaaccgctcgcaggattga
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