Lysobacter antibioticus ATCC 29479: GLA29479_3925
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Entry
GLA29479_3925 CDS
T04526
Name
(GenBank) outer membrane autotransporter barrel domain protein
Organism
laq
Lysobacter antibioticus ATCC 29479
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
PATR
Motif
Other DBs
NCBI-ProteinID:
ALN64776
LinkDB
All DBs
Position
4263524..4269847
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AA seq
2107 aa
AA seq
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MPADARCRLRLHPLSRGIAQAIPLLIALQMFAGQARAACTPAAPTDGATVSCTGVPILLP
PNPNSFLSNANNLDVTVQAGAIMSTLPGGTAMSLGGTGLTLNNLGAIDANAAGSLVLARA
LAVGNLVAPTSGNVAINNQGSIEGTFDGTFGLGGSAMLIANAGTTTIANSGSIGMSALGL
FDPVNSVAVAIYGGGNVNFTNTGTITGRVAFASPGSGGNVFVNAGTINGSVSLGTALSND
TFVAVTGSTLGNPLIPLPPVTVPTPTVPPGLLTFAATGTVDAGVGGFDTLVLQNTVAGPG
SGTGGSGSISALQYLNFENLTVNSGTWTLSGAVVSGSATLNGGLSLFDNALAFGTGTLTG
NGGAIEASLPGLTLTQNVNLTGGLIVQGGNSLSLGGTVGGAGGLIKNGTDTLSLLGSNNF
SGGLALNAGGLTLGSAGSLGTGLFLVGGPATLNTAFSGTLTNQVQLNGALTLNGAGALTL
AGNINGAGSLTLGSGALALTGSNNYSGGTVLQAGSIDVGNNSALGTGTLTVNGAGSLTGA
AGVTLSNNIVLNNTLNFGAGGSGGALTLNGTISGAGGISLAGASGVTLNGSNNFSGGFNL
GGGALTVGSNTALGSGAVTVSGAGSLDANTALSLANNFNLNAGLNILGSNDLALNGSIGG
LAGLTKSGAATLSLGNANAFAGGVNLLGGGLSVGTGTSLGLGTLTVNGAANFSSTAAVNL
GNAVVLNADLGIGGSNDIAFGGLITGAGGLNYGGSATLSLNGANGFGGGVGLASGNLSVG
NNLALGTGSLDVSGNAGLSAGVPGIALSNNVNLGTGTTLALSGANALALNGTIAGDGGLS
INGSGAFTLGGSNSFGGGVSLASGSLLLGTDASLGTGTLGVTGNASLASTGAALNLGNAI
NLGAGAGLTLGGAADLSFGGTIGGAGSLIKTGAGAVSLNGANNFGGGFDLQAGTLNLGTD
TALGSGALSVNGTATLNASTALNVSNAINLNAALSIGGANDLALGGSIGGSGGLSFNGPA
TLTLSGANAFNGGVALGGGTLAVGADLALGSGALNVGGNAGLTASAANIALANAINLGAG
TTLAISGANALSLDGSIGGAGGLAMNGTGTLELGGANLFGGGVALNAGMLGVGNNLALGT
GTLSVGGDAELTATAPAIALGNAITLASGAQLGIGGANDLALNGTIGGAGSLAFDGSGIL
TLGAANTFGGGFDLDAGTLALGSSTALGSGALDVGGNANLSAAVAGIDLANTVNVGAGSA
LSTIGNNALTLSGTVMGSGTLIKAGSAALTLSGNVAGFAGGLSVQGGTLNVGNPITAGFT
SAAGTSANFSGGVDQLSATGAIAGAVDLGGGDDRFYSSLANLAGITGSINGNSGSDTFAV
GGSGEGSLPWAALIGFEQLNLAAGGTLILPAGGTANFANSAIAGNLVLNGSLTGNAVVAA
GGALIGDGALTGALTLGGTLAPSGLAGATSAAGGNGSVGASLNVASLTFNPGATLQVRQT
GAGVTDSVIVAGTASLSGGQVVAIPQAGSYAPVTDYRIVDAGAISGAFTGVSQTALPFLD
ATLVTIGNDVFLRLSEHDVGGSGIRFNQFPGLSGNQQAVANALQTIADANSGQLPTLIAA
ARGLSAAQAPRAFDTLSGETYASIVSAQRYNAEQLQRSVARQLDRVRDAGVEDEDTLGTL
WATAYGGRAEFDGEGLAGIDNSLAGFAMGLEGSPGANFRFGGHVGMAHSKMETDRRDDQV
EADLFNVGIQWLYAPGPFWTQGAVGYSYASYDAEREIAVGTFNARTDAHFSGDGVYGMLE
AGWRWDGASLRIEPLLGVYYSKLEAIRFSERGGGDANLVVNSDSFDATTAGIGVRFSGLP
GQGARKWQPTADIRYLRDLQDDRPFARNAFAGASVPDFGVNGFVAERNRWNVGLGLSYRL
SPVSSGFIEYRGDIGSDDRAHSLNMGLRLGWGGKAAVAAARAAPWAGAQANAGGVDPAAT
TSSTAKKASPAPAVAAAAVGSGTAVAASPASSAGTTAPTATAPANYGYCPIKPAGASKAA
GSVANAKARAARPISKSKRVASRGTGIKAKPRRSATRLAAQTPPPAPPSGAVALPSHWCD
EASARVD
NT seq
6324 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcagatgcgcgttgtcgtcttcgccttcatcccctcagccgcggcatcgcccag
gcgatcccgctgctgatcgcgctgcagatgttcgccggccaggcccgtgccgcgtgcacg
ccggccgcgccgaccgacggcgcaacggtcagctgcaccggcgtgccgatcctgctgccg
ccgaatccgaacagtttcctcagcaacgccaacaatctcgacgttaccgtccaggccggc
gcgatcatgagcacgctgccgggcggcaccgcgatgagtttgggcggcaccggcctgacc
ctcaacaacctcggcgccatcgacgccaatgccgccggctcgctggtgctggcgcgcgcg
cttgcggtcggtaacctggtcgcgccgaccagcggcaacgtcgccatcaacaaccagggt
tcgatcgaaggcaccttcgacggcaccttcggtctcggcggctcggcgatgttgatcgcc
aacgccggcaccaccaccatcgccaacagcggttcgatcggcatgagcgcgctcggcctg
ttcgatccggtcaactcggtggcagtggcgatctacggcggcggtaacgtcaatttcacc
aataccggcacgatcaccggccgcgtcgccttcgccagcccgggcagcggcggtaacgtt
ttcgtcaacgccggcacgatcaacggcagcgtctcgctgggcaccgcgctcagcaacgac
accttcgtcgcggtgaccggttccacgctcggcaatccgctgattccgctgccgccggtg
acggtacccacgccgaccgtgccccccggtctgctgaccttcgccgccaccggcaccgtg
gacgccggcgtcggcggcttcgacaccctggtgctgcaaaacaccgtcgccggccccggt
tccggcaccggcggcagcggttcgatctcggcgctgcaatacctcaacttcgaaaacctg
accgtcaacagcggcacctggaccttgagcggcgccgtggtcagcggcagcgcgaccctc
aacggcggcttgtcgttgttcgacaacgccctggcgttcggcaccggtacgctgaccggc
aacggcggcgcgatcgaagcctcgctgccgggattgaccttgacgcagaacgtcaacctc
accggcggcttgatcgtgcaaggcggcaacagcctgagcctcggcggcaccgtcggcggc
gccggcggcctgatcaagaacggcaccgacacgctgtcgctgctcggcagcaacaacttc
agcggcggcctcgcgctcaacgccggcgggctcactctcggcagcgccggctcgctcggc
accggattgttcctggtcggcggcccggcgacgctcaacaccgccttctccggcaccttg
accaaccaagtgcagctcaacggcgcgctgacgctcaacggcgccggtgcgctcaccctt
gcgggcaatatcaacggcgccggcagcctgaccctgggcagcggcgcgctggcgctgacc
ggcagcaacaactacagcggcggcaccgtgctgcaggctggctcgatcgatgtcggcaac
aacagcgcgctcggcaccggcaccctgaccgtcaacggcgccggcagcctgaccggcgcg
gccggggtgaccctgagcaataacatcgtgctcaacaacaccctcaacttcggcgccggc
ggcagcggcggcgcgctgaccctcaatggcacgatcagcggcgccggcggcatcagcctc
gccggtgcgtccggggtcaccctcaacggcagcaataatttttccggcggcttcaatctc
ggcggcggcgcactgacagtcggcagcaacaccgccctcggcagcggtgcggtcaccgtc
agcggcgccggctcgctggatgccaacactgcgctcagtctggccaacaacttcaatctc
aatgcgggtttgaacatactcggcagcaacgacctcgccctcaacggcagcatcggcggc
ctcgccggtctgaccaaaagcggcgcggccacactcagcctcggcaatgccaacgccttt
gccggcggcgtcaatctgctcggcggcgggctcagcgtcggcaccggcacttcgctcggc
ctgggcacgttgacggtcaacggcgcggcgaacttcagctccacggccgcggtcaacctc
ggcaacgccgtggtgctgaatgccgacctcggcatcggcggcagcaacgacatcgcgttc
ggcggcctgattaccggcgccggcggtttgaactacggcggcagcgccaccttgagcctc
aacggcgccaacggcttcggcggcggtgtcggtctggccagcggcaacctcagcgtcggt
aacaatctggcactcggcaccggctcgctcgatgtcagcggcaatgccggattgagcgcg
ggcgtgcccggcatcgccctgtccaacaacgtcaatctgggcaccggcaccacgctcgcc
ctgagcggcgccaacgcgctcgcgctcaacggcacgatcgccggcgacggcggactgtcg
atcaacggcagcggcgctttcaccctcggcggcagcaacagcttcggcggcggtgtctcg
ctcgcctccggcagcctgctgctcggcaccgatgcgtcgctcggcaccggcacgctcggc
gttaccggcaatgccagtctcgccagtaccggcgcggccttgaacctcggcaatgccatc
aacctcggcgccggcgccggccttaccctcggcggcgccgccgacctcagcttcggcggc
accatcggcggcgccggctcgctgatcaagaccggtgccggcgcggtctcgctcaatggc
gccaacaacttcggcggcggcttcgacctgcaggccggcacgctcaatctcggcaccgat
accgcgctcggcagcggcgcgctgtcggtcaatggcacggccacgctcaatgccagcacc
gccttgaacgtaagcaatgcgatcaacctcaacgccgcgctgagcatcggcggcgccaac
gatctcgccctcggcggcagcatcggcggcagcggcggcctgagtttcaacggccccgcc
acgctcacgctcagcggcgccaacgcgttcaacggcggcgttgcgctcggcggcggcacc
ctcgcggtcggcgcggatctcgccctcggcagcggcgcgctcaacgtcggcggcaacgcc
ggcctgaccgccagcgcggcgaacatcgccttggctaatgcgatcaatctcggtgccggt
acgacgctcgctatcagcggtgccaacgcgctctcgctcgacggcagcatcggcggcgcg
ggcggcctggcgatgaacggcaccggcacgctcgagctcggcggcgccaacttgttcggt
ggcggcgttgcgctcaatgccggcatgctgggcgtcggcaacaatctcgctctcggcacc
ggcacgctcagcgtcggtggagatgccgaactcaccgcaaccgcaccggccatcgcgctc
ggcaatgcgatcaccttggcgagcggcgcgcagttgggtatcggcggcgccaacgatctc
gccctcaacggcacgatcggcggcgccggcagtttggccttcgacggcagcggcatcctg
accctcggcgccgccaataccttcggcggcggtttcgatctcgacgccggcacgctcgcg
ctgggcagctccactgcgctcggcagcggcgcgctcgatgtcgggggcaacgccaacctc
agtgccgcggtcgccggcatcgatctggccaacaccgtcaacgtcggcgccggcagcgcg
ctcagcacgatcggcaacaacgcactgaccctgagcggcacggtcatgggcagcggcact
ttgatcaaggccggcagcgccgcgctgaccctcagcggcaacgtcgccggtttcgccggt
ggcctgtcggtgcagggcggcaccctcaacgtcggcaatccgatcaccgccggtttcacc
tcagcggccggcaccagcgccaacttcagcggcggcgtcgaccaactcagcgcgaccggc
gcgatcgccggcgcggtcgatctcggcggcggcgacgaccgtttctacagcagcctggcg
aacctggccggcatcaccggctccatcaacggcaacagcggcagcgatactttcgcggtc
ggcggcagcggcgagggcagcttgccctgggctgcgttgatcggcttcgaacagctcaac
ctcgctgccggcggcaccctgatcctgcccgccggcggcaccgccaacttcgccaacagc
gccatcgccggcaacctggtgctcaatggcagcctgaccggcaacgctgtcgtcgcggcg
ggcggcgcactgattggggacggcgcgttgaccggcgcgttgacgctcggcgggaccctc
gcgccttccggcctggccggagcgacgagtgcggccggcggcaacgggtcggtcggcgcg
tcgctcaatgtcgccagcctgaccttcaatcccggcgcgaccctgcaagtgcggcagacc
ggcgccggcgtcaccgacagcgtgatcgttgccggcacggcgagcttgagcggcggccag
gtcgtggcgattccgcaggccggcagctacgcgccggttaccgactaccgcatcgtcgat
gcgggcgcgatcagcggcgccttcaccggcgtctcgcagaccgccttgccgttcctcgat
gcgaccctggtgacgatcggcaacgacgtgttcctgcgcttgagcgaacacgacgtcggc
ggtagcggcatccgcttcaaccagttccccggcctcagcggcaatcaacaggccgtggcc
aacgccttgcagacgatcgccgacgccaacagcggtcagttgccgaccttgatcgcggcc
gcacgcggcctcagcgcggcgcaggcaccgcgcgccttcgacacgctcagcggtgagacc
tacgcctccatcgtcagcgcccagcgctacaacgccgagcaattgcagcgcagcgtcgcc
cgccaactcgaccgcgtgcgcgatgccggcgtcgaggacgaggacaccctcggcaccttg
tgggcgaccgcttacggcggccgcgccgagttcgacggcgaaggcctggccggcatcgac
aactcgctggccggtttcgcgatgggcctggaaggttcgcccggcgcgaacttccgtttc
ggcggccacgtcggcatggcccactcgaagatggaaaccgaccgtcgcgacgaccaggtc
gaagccgacctgttcaatgtcggcatccagtggctgtatgcgccgggcccgttctggacc
cagggtgcggtcggctacagctacgccagctacgacgccgagcgcgagatcgcggtcggt
accttcaacgcccgcaccgatgcgcatttcagcggcgacggcgtgtacggcatgctcgaa
gccggttggcgctgggacggcgcgagcctgcgcatcgaacccttgctcggcgtttactac
agcaagctcgaagcgatccgcttcagcgaacgcggcggcggcgacgccaacctggtggtg
aacagcgacagtttcgacgccaccaccgccggtatcggcgtgcgcttctccggcctgccc
ggccagggcgcacgcaagtggcagccgaccgcggacatccgttatctgcgcgacctgcag
gacgaccggccgttcgcgcgcaacgccttcgccggcgcgagcgtgcccgacttcggcgtc
aacggcttcgtcgccgagcgcaatcgctggaacgtcggcctgggcctgtcctaccggctc
agcccggtcagcagcggcttcatcgaataccgcggcgacatcggcagcgacgatcgcgcg
cattcgctcaacatgggcctgcgcttgggttggggcggcaaggccgcggtcgcggctgcg
cgcgcggcaccgtgggccggtgcccaggccaatgcgggcggggtcgatccggccgctacg
accagctcgactgcgaagaaggcatcgccggcaccggctgtcgcagcggctgcggtcggt
agcggaaccgctgtggcggcgtccccggcttcgagcgcgggcacgaccgcgccgacggct
acggcgccggccaactacggctattgcccgatcaagcccgcgggcgcgtcgaaggccgcg
ggttcggtcgccaatgccaaggcccgagccgcgcggccgatctccaagagcaagcgtgtc
gcttcgcgcggcaccggcatcaaggcgaagccacgtcgcagtgcgacgcggctcgccgcc
cagacaccgcctcccgcccctccgtcgggtgcggtggccctgccgtcgcactggtgcgac
gaggcttcggcccgggtcgactag
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