Lysobacter antibioticus ATCC 29479: GLA29479_517
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Entry
GLA29479_517 CDS
T04526
Name
(GenBank) glycosyl hydrolase family 20, catalytic domain protein
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
laq
Lysobacter antibioticus ATCC 29479
Pathway
laq00511
Other glycan degradation
laq00520
Amino sugar and nucleotide sugar metabolism
laq00600
Sphingolipid metabolism
laq01100
Metabolic pathways
laq04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
laq00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
GLA29479_517
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
GLA29479_517
00511 Other glycan degradation
GLA29479_517
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
GLA29479_517
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
laq03110
]
GLA29479_517
Enzymes [BR:
laq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
GLA29479_517
Chaperones and folding catalysts [BR:
laq03110
]
Intramolecular chaperones
Others
GLA29479_517
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
Glyco_hydro_20b
Fn3_assoc
CBM_6
CHB_HEX_C_1
Motif
Other DBs
NCBI-ProteinID:
ALN61402
LinkDB
All DBs
Position
complement(541600..544017)
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AA seq
805 aa
AA seq
DB search
MKTRTAWNLALASAAAIGLAACQNTTSPAGSTSASSSSADATSTAASGAEPAIAAHASAV
IPRPAQVVAGEGRFVFGPQTRLVVAADDAAARRVAEDFAARVRQLRGFAPSIDSGGKAGA
DAIVFALDPKSAAGDEAYTLDIGRDGVRVQARAAAGLFYGAVTLWQLATADGGKGAASIA
AQRIDDAPRFVWRGLMLDVARHFRSVDEVKSVIDQMALHKLNTFHWHLTDDQGWRVEIKK
YPRLTEVGGCRILAGAAGRDAEGKPKPYCGYYTQEQIRDVVRYAAERHITVVPEIEMPGH
AQSAIAAYPELGVTDVVRKAPPVSPDWGVHTYLYGVDDSTFGFLENVLDEVVGLFPSRYI
HIGGDEAAKDQWIASPNVQAKIKSLGLKDEMALQSWFVGRIAGHLQKHDRILLGWDEILE
GGKLPASATVMSWRGTKGAVEAARDGHDVVVAPDRQLYLDYVQSDRDDEPSGRFPISTLR
DFYQFSVVPAELDAAQSKHVLGAQANLWAEHRRSFERIQTALYPRLDALSEVVWSPQARI
DWNDFQQRLAAQMARYRAQDVKASDVAYAVKFKVEDGADGAAPKLALSNQTGFGEIRYRT
DGQDPGVDAPLYTQPLAATLPLDLVATTFVDGKAISAPRRFSARDLSDLSTRTSAGLRPC
REGYNLRLEDDAAIEGKGDGARASLTTNLIDPCWIYEGARLDGVGRIEVRVGQVPYNFQL
WHDTKNIVTRKAELGGALEVRVDDCKSAPIARLPLAEAKRSDGLSTLQATLPKLAGRHDL
CFVFASGGHDPLWALDRVTLRPAAN
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacgcgtaccgcctggaacctggccctggccagcgccgcggcgatcggactggcc
gcctgccagaacacgacctcgccggccggctctacctcagccagctccagctcagccgac
gccacctccaccgccgcgagcggcgccgagccggcgatcgccgcgcatgcgagcgcggtg
atcccgcgtccggcgcaagtcgtcgccggcgaagggcggttcgtgttcgggccgcagacc
cgcctggtcgtcgccgccgacgatgcggccgcgcgtcgcgtcgccgaggatttcgccgcg
cgcgtgcggcagttgcgcggcttcgcgccgagcatcgacagcggcggcaaggccggcgcc
gatgcgatcgtgttcgcgctggatcccaagtccgccgccggcgacgaggcctataccctc
gacatcggccgcgacggcgtacgcgtgcaggcgcgcgccgccgccggcctgttctacggc
gcggtcacgttgtggcaactggccaccgccgacggcggcaaaggcgcggcgagcatcgcc
gcgcagcgcatcgacgacgccccgcgtttcgtctggcgcggcctgatgctcgatgtcgcc
cgccacttccgcagcgtcgacgaggtcaagtcggtcatcgaccagatggcgctgcacaag
ctcaataccttccactggcatctcaccgacgaccagggctggcgcgtggagatcaagaag
tacccgcgcctgaccgaggtcggcggttgccgcatcctcgccggcgccgccggccgcgat
gccgagggcaagccgaaaccttattgcggctattacacccaggaacagatccgcgacgtc
gtgcgctacgccgccgagcgccacatcaccgtggtccccgaaatcgaaatgcccggccac
gcgcaatcggcgatcgccgcctacccggaactcggcgtcaccgacgtcgtgcgcaaggcg
ccgccggtgtcgccggactggggcgtgcacacctacctgtacggcgtcgacgattccact
ttcggcttcctcgaaaacgtcctcgacgaagtcgtcggcctgttcccctcccgctacatc
cacatcggcggcgacgaagcggccaaggaccagtggatcgcctcgccgaacgtgcaggcc
aagatcaagtcgctcggcctcaaggacgagatggcgctgcagagctggttcgtcggccgc
atcgccggccatctgcagaagcacgaccgcatcctgctgggctgggacgagatcctcgaa
ggcggcaagctgccggccagcgcgacggtgatgtcctggcgcggcaccaagggcgcggtc
gaggccgcgcgcgatggccacgacgtggtcgtcgcgccggaccgccagctctacctcgac
tacgtccagagcgaccgcgacgacgagccgagcgggcgcttcccgatcagcaccctgcgc
gacttctatcagttctcggtggtgccggccgagctcgacgcggcccagagcaagcacgtg
ctcggcgcccaggccaacctgtgggccgagcaccggcgcagcttcgagcgcatccagacc
gccttgtacccgcgcctggatgcgctgtcggaagtggtctggtcgccgcaggcgcggatc
gactggaacgacttccagcagcgcctggccgcgcagatggcgcgctaccgcgcccaggac
gtgaaggcctccgacgtcgcctacgcggtcaagttcaaggtcgaggacggcgccgacggc
gccgcgccgaagctggcgctgagcaaccagaccggcttcggcgagatccgctaccgcacc
gacggccaggaccctggcgtcgacgccccgctgtacacgcagccgctcgccgcgaccctg
ccgctggacctggtggcgaccaccttcgtcgacggcaaggcgatctcggcgccgcgccgc
ttcagcgcccgcgacctgtccgacctgagcacccgcaccagcgccggcctgcgcccttgc
cgcgagggctacaacctgcgcctggaggacgacgccgcgatcgaaggcaagggcgacggc
gcccgcgcctcgctgaccaccaacctgatcgacccctgctggatctacgaaggcgcccgc
ctcgacggggtcggccggatcgaggtccgggtcggccaggtgccctacaacttccaactc
tggcacgacaccaagaacatcgtgacccgcaaggccgagctcggcggcgccctggaagtg
cgcgtcgacgactgcaagagcgcaccgatcgcgcgtctgccgctggccgaggccaaacgt
tcggacggtctgagcacgctgcaggcgaccctgccgaagctcgccggccgccacgacctg
tgcttcgtcttcgccagcggcggccacgaccccttgtgggcgctcgaccgcgtgaccctg
cgcccggccgcgaactga
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