Lysobacter antibioticus ATCC 29479: GLA29479_586
Help
Entry
GLA29479_586 CDS
T04526
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
laq
Lysobacter antibioticus ATCC 29479
Pathway
laq00521
Streptomycin biosynthesis
laq00523
Polyketide sugar unit biosynthesis
laq00541
Biosynthesis of various nucleotide sugars
laq01100
Metabolic pathways
laq01110
Biosynthesis of secondary metabolites
laq01250
Biosynthesis of nucleotide sugars
Module
laq_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
laq00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
GLA29479_586 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
GLA29479_586 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
GLA29479_586 (rfbC)
Enzymes [BR:
laq01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
GLA29479_586 (rfbC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
ALN61471
UniProt:
A0A0S2F8G0
LinkDB
All DBs
Position
complement(611818..612375)
Genome browser
AA seq
185 aa
AA seq
DB search
MKVIETDLPGCLVVEPRVFADSRGFFYESFNHDKLAEYGLAPQFVQGNVSSSSRGVLRGL
HYQWPKPQGKYISVIEGEVWDVAVDIRRGSPHYGRWTAVVLSAENKRHMWIPEGFAHGFV
TLSERAIFSYLCTQTYDASADAAIRWDDPDLAIDWPVSDPSLSAKDAAAPLLKDVVEDRL
PVYTP
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcatcgaaaccgatctgcccggctgcctcgtcgtcgaaccgcgggtgttcgct
gactcgcgcggcttcttctatgaatcgttcaaccacgacaagctcgccgagtacggcctg
gcgccgcagttcgtgcaaggcaatgtttcctcgtcgtcgcgtggcgtgctgcgcgggttg
cactatcaatggccgaagccgcaaggcaagtacatctcggtgatcgaaggagaggtctgg
gacgtggcggtggatattcgccgcggttcgccgcactacgggcgttggaccgcggtcgtt
ctgagcgccgagaacaagcggcatatgtggattccagagggtttcgcgcatggcttcgtc
acgttgagcgagcgggcgatcttcagttacctgtgtacgcaaacctacgatgcgagcgct
gatgcggcgattcgttgggacgatccggacctcgccatcgactggccggtcagcgatccg
tccttgtccgctaaggacgccgccgctcccttgctcaaggacgtcgtcgaagaccgcctg
ccggtctacacgccatga
DBGET
integrated database retrieval system
