KEGG   Lysobacter antibioticus ATCC 29479: GLA29479_588
Entry
GLA29479_588      CDS       T04526                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
laq  Lysobacter antibioticus ATCC 29479
Pathway
laq00521  Streptomycin biosynthesis
laq00523  Polyketide sugar unit biosynthesis
laq00525  Acarbose and validamycin biosynthesis
laq00541  Biosynthesis of various nucleotide sugars
laq01100  Metabolic pathways
laq01110  Biosynthesis of secondary metabolites
laq01250  Biosynthesis of nucleotide sugars
Module
laq_M00793  dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:laq00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    GLA29479_588 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    GLA29479_588 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    GLA29479_588 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    GLA29479_588 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    GLA29479_588 (rfbB)
Enzymes [BR:laq01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     GLA29479_588 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase RmlD_sub_bind Polysacc_synt_2 3Beta_HSD NAD_binding_4 adh_short
Other DBs
NCBI-ProteinID: ALN61473
LinkDB
Position
complement(613294..614331)
AA seq 345 aa
MTGGAGFIGGNFVLDAVRKGVKVVNLDALTYAGNLDTLSSLDGNPNHVFIQGDIGDAALL
KRLLAEHRPEAVVNFAAESHVDRSIEGPAAFVQTNVVGTLSLLEQVRDYWKQLDAPARDA
FRFLHVSTDEVYGSLGDTGKFTETTPYAPNSPYSASKAASDHLVRAFHHTYGLPVLTTNC
SNNYGPFQFPEKLIPLIIAKALAGEPLPVYGDGLNVRDWLFVGDHCAAISRVLEAGRIGE
TYNVGGDAERANIVVVKTICALLDARRPLADGRARESLIAYVADRPGHDRRYAIDADKLK
DELGWAPTVTFEEGIARTVDWYLGNQAWVQRVLDGSYRLERIGQA
NT seq 1038 nt   +upstreamnt  +downstreamnt
gtgaccggcggcgccggattcatcggcggtaacttcgttctcgatgcggtccgcaaaggg
gtcaaggtcgtcaatctcgacgccctgacttatgcgggcaatctcgacaccctcagcagc
ctggacggcaacccgaaccacgtgttcatccagggcgacatcggcgatgccgccctgctc
aagcgtctgctggccgagcaccgcccggaggcggtggtcaatttcgccgccgaaagccac
gtcgaccgctcgatcgaaggtccggcggcattcgtgcagaccaacgtcgtcggcaccctg
agcctgctcgagcaggtgcgcgactactggaagcagctcgatgcgccggcccgcgacgcg
ttccgtttcctgcacgtgtcgaccgacgaggtctacggcagtctcggcgacacgggcaag
ttcaccgagaccacaccgtatgcgccgaactcgccgtactcggcctccaaggccgcttcc
gatcatctggtgcgggcgttccaccacacctacggtctgccggtgctgaccacgaattgc
tcgaacaactacgggccgttccagttcccggagaaactcatcccgctgatcatcgccaag
gcgctggccggcgagccgctgccggtctacggcgacggcctcaacgtccgggactggttg
ttcgtcggcgatcactgcgcggcgatttcgcgcgtgctcgaagccggccgcatcggcgag
acctacaacgtcggcggcgatgccgagcgggcgaacatcgtcgtggtcaagacgatctgc
gcgctgctcgacgcacgtcgcccgctcgccgacggccgtgcccgcgaatcgttgatcgcc
tatgtcgccgaccgcccgggccacgatcgccgttacgcgatcgatgccgacaagctcaag
gacgagctcggctgggcgcccacggtcacttttgaagagggcatcgcccgtacggtcgac
tggtacctcggcaaccaggcctgggtgcagcgcgtgctcgacggcagctatcgactggaa
cgcatcggccaggcctga

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