Lysobacter antibioticus ATCC 29479: GLA29479_866
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Entry
GLA29479_866 CDS
T04526
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
laq
Lysobacter antibioticus ATCC 29479
Pathway
laq00541
Biosynthesis of various nucleotide sugars
laq01100
Metabolic pathways
laq01250
Biosynthesis of nucleotide sugars
Module
laq_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
laq00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
GLA29479_866 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
laq01005
]
GLA29479_866 (kdsA)
Enzymes [BR:
laq01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
GLA29479_866 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
laq01005
]
Lipid A
GLA29479_866 (kdsA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
PEP_mutase
NeuB
Motif
Other DBs
NCBI-ProteinID:
ALN61750
UniProt:
A0A0S2FE73
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All DBs
Position
complement(907779..908612)
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AA seq
277 aa
AA seq
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MKLCGFDVGLDQPFFLIAGPCVIESMQLQLDVAGQLKEITSSLGIPFIFKSSFDKANRTS
ATSFRGPGMEEGLKVLAEVKRQIGVPVLTDVHEYTPMDEVASVVDVLQTPAFLCRQTDFI
QKVARAGKPVNIKKGQFLSPWEMKHVTAKAQATGNQQIMACERGASFGYNNLVSDMRSLS
VMRDTGCPVVFDATHSVQLPGGMDGKSGGQREFVPVLARAAIAVGVSGVFMETHPRPEEA
LSDGPNAVPLPKMRALLETMVELDRITKKNGFLEQDF
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgaaactttgcggctttgatgtcggtctcgaccagcctttcttcctgatcgccggcccc
tgcgtgatcgagtcgatgcaattgcagctcgacgtcgccggccagctcaaggaaatcacg
tcctcgctcggcattcccttcatcttcaagtcgagcttcgacaaggccaaccgcacctcg
gcgacgagcttccgcgggccgggcatggaggaggggctcaaggtcctggccgaggtcaag
cgccagatcggcgtgccggtgctgaccgacgtgcacgaatacacgccgatggacgaggtc
gcctcggtcgtcgacgtgctgcagaccccggctttcctgtgccgccagaccgatttcatc
cagaaagtcgcgcgcgccggcaagccggtcaacatcaagaagggccagttcctctcgccc
tgggagatgaagcacgtcaccgccaaggcccaggccaccggcaaccagcagatcatggcc
tgcgaacgcggcgcgagcttcggctacaacaacctggtcagcgacatgcgctcgctgtcg
gtgatgcgcgacaccggttgcccggtggtgttcgacgcgacccattcggtgcagttgccc
ggcggcatggacggcaagtccggcggccagcgcgaattcgtgccggtgctggcgcgcgcg
gcgatcgcggtcggcgtgtccggcgtgttcatggaaacccacccgcgccccgaagaagcc
ctgtccgacggccccaacgcggtgccgctgccgaagatgcgcgcgctgctcgagaccatg
gtcgagctggaccgcatcaccaagaagaacggctttttggaacaagatttctga
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