Leisingera aquaemixtae: R2C4_02015
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Entry
R2C4_02015 CDS
T06085
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
laqu
Leisingera aquaemixtae
Brite
KEGG Orthology (KO) [BR:
laqu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
laqu03032
]
R2C4_02015 (ihfB)
03036 Chromosome and associated proteins [BR:
laqu03036
]
R2C4_02015 (ihfB)
03400 DNA repair and recombination proteins [BR:
laqu03400
]
R2C4_02015 (ihfB)
DNA replication proteins [BR:
laqu03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
R2C4_02015 (ihfB)
Chromosome and associated proteins [BR:
laqu03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
R2C4_02015 (ihfB)
DNA repair and recombination proteins [BR:
laqu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
R2C4_02015 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
QDI74598
LinkDB
All DBs
Position
35463..35747
Genome browser
AA seq
94 aa
AA seq
DB search
MIRSELIQKIADENPHLYQRDVERIVNTVFEEVTNAMARGDRVELRGFGAFSVKKRDSRV
GRNPRTGETVHVEEKHVPFFKTGKLLRDRLNGKA
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgatccgctctgagttgattcagaagattgcagacgaaaacccgcacctgtatcagcgg
gatgtggagaggatcgtgaacacggtgtttgaggaagtaaccaacgcgatggcccggggc
gaccgggtggagctgcgcggtttcggtgccttctcggtcaagaagcgggactcgcgggtc
ggccgcaatccccgcaccggtgaaaccgtccatgtcgaggaaaaacatgtgccgttcttc
aagacgggtaaactcttgagggaccgcctgaacgggaaagcctga
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