Leisingera aquaemixtae: R2C4_05560
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Entry
R2C4_05560 CDS
T06085
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
laqu
Leisingera aquaemixtae
Pathway
laqu00730
Thiamine metabolism
laqu01100
Metabolic pathways
laqu01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
laqu00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
R2C4_05560 (thiC)
Enzymes [BR:
laqu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
R2C4_05560 (thiC)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
QDI75244
LinkDB
All DBs
Position
complement(792683..794497)
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AA seq
604 aa
AA seq
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MNVPNPKITTGALPASRKIYVSGEVHEDIRVPMREISTHPTAAEAPLPVYDSSGPYTDPD
VLTDIRQGLPALRHQWILARGDVERYQGRDVKPEDNGFVEGDRLTPEFPVKPAPLRGKDG
KAPTQLAYARAGLITPEMEFVAIRENQLRELSPCHANRDGNDFGANIPDYVTPEFVRQEI
AAGRAIIPANINHPEIEPMIIGRNFKVKINANMGTSAVTSSMEEEVDKLVWAIRWGADTV
MDLSTGRNIHNTREWIVRNSPVPIGTVPIYQALEKVNGIAEDLTWEVFRDTLIEQAEQGV
DYFTIHAGVRLHMVPMTVNRVTGIVSRGGSIMAKWCLHHHKESFLYEHFEEICDICRQYD
VSFSLGDGLRPGSIADANDEAQFAELETLGELTKIAWAKDCQVMIEGPGHVAMHKIKENM
DKQLECCHEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGCAMLCYVTPKEHLGLPDR
DDVKTGVITYKIAAHAADLAKGLPGAQRRDDALSRARFEFRWEDQFNLSLDPDTAREFHD
QTLPKQAHKVAHFCSMCGPKFCSMRISHDIRAEAQKEGMEAMAAKFREGGELYVPAAEAA
ELAE
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtccccaacccgaaaatcaccacaggtgccttgcccgcgtcgcgcaagatctac
gtcagcggcgaggtccatgaggacatccgcgtgccgatgcgggaaatctccacccacccc
accgcggccgaggcgccgctgccggtctatgacagctccggcccctataccgacccggac
gtgctgaccgacatccgccagggcctgcccgcgctgcgccaccagtggatcctcgcccgc
ggcgacgttgagcgctatcagggccgcgacgtgaagccggaggacaacggctttgtcgag
ggcgaccggctgacgccggaattcccggtgaaacccgcgccgctgcgcggcaaggatggc
aaggcgccgacccagctggcctacgcgcgtgcagggctaatcacgccggagatggagttc
gtggcgatccgcgaaaaccagctgcgcgagctgtcgccctgccatgcaaatcgcgacggc
aatgatttcggcgccaacatccctgattacgtgacgccggagttcgtacgccaggagatc
gccgccggccgcgccatcatcccggccaacatcaaccacccggaaatcgagccgatgatc
atcggccgcaacttcaaggtgaagatcaacgccaatatgggcacctctgccgtcacctcc
tcgatggaggaagaggtcgacaagctggtctgggcgatccgctggggcgccgacacggtg
atggacctgtccacgggccgcaacatccacaacacccgcgaatggatcgtgcgcaactcg
cccgttccgatcggcacggtgccgatctaccaggcgctggagaaagtaaacggcatcgcc
gaggacctgacctgggaagtgttccgcgacacgctgattgagcaggcggaacagggcgtc
gattatttcaccatccatgccggtgtgcggctgcatatggtgccgatgacggtgaaccgg
gtgacggggattgtctcgcgcggcggctcgatcatggcgaagtggtgcctgcatcaccac
aaggagagcttcctctatgaacatttcgaggagatctgcgacatctgccgccagtatgac
gtctccttctcgctgggcgacgggctgcgccccggctccatcgccgacgccaatgacgag
gcgcagtttgccgagctggaaaccctgggtgagctgaccaagatcgcctgggccaaggat
tgccaggtgatgatcgaggggccgggccatgtcgccatgcacaagatcaaggagaacatg
gacaagcagctggagtgctgccacgaggcgccgttctatacgctggggccgctgaccacc
gacatcgcgccgggttatgaccacatcaccagcggcatcggggcggcgatgatcggctgg
ttcggctgcgcgatgctgtgctacgtgacgccgaaggagcacctgggcctgccggaccgc
gacgatgtgaaaaccggggtgatcacctacaagatcgcggcccatgctgccgaccttgcc
aaggggctgccgggcgcccagcgccgcgacgatgcgctgagccgtgcccggttcgagttc
cgctgggaggatcagttcaacctgtcgctggaccccgacacggcgcgcgaattccacgac
cagaccctgccgaaacaggcgcacaaggtggcgcatttctgctccatgtgcgggccgaag
ttctgctccatgcggatcagccacgacatccgcgccgaggcgcagaaggaaggcatggag
gccatggccgccaagttccgggaaggcggcgaactctatgtgcctgccgccgaggctgcg
gagctggccgaatga
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