Leisingera aquaemixtae: R2C4_05760
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Entry
R2C4_05760 CDS
T06085
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
laqu
Leisingera aquaemixtae
Pathway
laqu03420
Nucleotide excision repair
laqu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
laqu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
R2C4_05760
03430 Mismatch repair
R2C4_05760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
laqu03400
]
R2C4_05760
Enzymes [BR:
laqu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
R2C4_05760
DNA repair and recombination proteins [BR:
laqu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
R2C4_05760
MMR (mismatch excision repair)
Other MMR factors
R2C4_05760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
AAA_11
DEAD
Motif
Other DBs
NCBI-ProteinID:
QDI75279
LinkDB
All DBs
Position
829441..831810
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AA seq
789 aa
AA seq
DB search
MSSFDEMDAFEGASLSARAMQARPMPYLDSLNPAQREAVECLDGPVLMLAGAGTGKTKAL
TTRIVHLLNTGRARPKEILSVTFTNKAAREMKERVGAMLGQAVEGMPWLGTFHSICVKLL
RRHAELAGLKSNFTILDTDDQIRLLKQLIQAAGIDDKRWPARMLAGIIDDWKNRALTPDR
VPAADAGAYNNRGTEFYAQYQTRLRELNAVDFGDLLLHMVTIFQNHPDVLEQYQRWFRYI
MVDEYQDTNVAQYLWLRLLAGKHKNVCCVGDDDQSIYGWRGAEVGNILRFEKDFPGAMVV
RLEQNYRSTGHILAAAAGVIRGNQGRLGKELWTEAGDGEKVRLIGHWDGEEEARWIGEEI
EAMQRGTRGQAPLGLDQMAILVRASHQMRAFEDRFLTIGLPYRVIGGPRFYERMEIRDAM
AYFRVVVSPDDDLAFERIVNTPKRGLGDKAQQTIQGLARENGVSLVEGARLAVEGGQIKG
KGGGALRELVEGIARWGRMAGDPDLTHMELAEIILDESGYTAMWQNDKTPEAPGRLENLK
ELVKALESFENLQGFLEHVSLVMDNDKQDADEKVSIMTLHAAKGLEFPAVFLPGWEDGLF
PSQRSMDESGLKGLEEERRLAYVGITRAEQICTISFAGNRRVFGQWQSQLPSRFIDELPE
EHVEVLTPPGLYGGGYGAAAPGASMGAGQVRSTIEEKMAQADGYNSPGWKRMQARAGQRG
LSQPKESKHQVIDLTATSSFTLGERVFHQKFGYGAITGIEGDKLEVDFEKAGTKKVVARF
VSTPDDVPF
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtttcgacgaaatggacgcctttgagggcgcatcgctgtcggcccgcgccatg
caggcgcggccgatgccgtatctggacagcctcaaccccgcccagcgggaggcggttgaa
tgcctcgacggcccggtcctgatgctggcgggcgcgggcaccggcaagactaaggcgctg
accacccgcatcgtgcaccttctcaacaccggccgggcgcgcccgaaagagattctgtcg
gtgaccttcaccaacaaggccgcccgcgaaatgaaggagcgggtcggggcgatgctgggc
caggcggtcgaggggatgccctggctcggcaccttccactcgatctgcgtcaagctgctg
cgccgccacgcggaactggcggggctgaaatcgaacttcaccattctcgacaccgatgac
cagatccgcctgctgaaacagctgatccaggccgcgggcatcgacgacaagcgctggccc
gcgcggatgctggccggaatcatcgacgactggaagaaccgcgcgctgacgccggacagg
gtgcctgccgccgatgctggcgcctacaacaaccgcggcaccgagttttatgcccagtac
cagacccgcctgcgcgagctgaacgcggtcgatttcggcgacctgctgttgcacatggtg
acgatcttccagaaccatccggacgtgctggagcagtaccagcgctggttccgctacatc
atggtggacgaataccaggataccaacgtcgcccagtacctgtggctgcggctcttggcg
ggcaagcacaagaacgtctgctgcgtcggcgacgacgaccagtcgatctatggctggcgc
ggtgccgaggttggcaacatcctgcggttcgaaaaggattttcccggcgccatggtggtc
cggctggagcagaactaccgctccaccggccatatccttgccgccgccgcgggcgtcatc
cgcggcaaccagggccgcctgggcaaagagctgtggaccgaggccggcgacggcgaaaag
gtccgcctgatcggccattgggacggcgaggaagaggcccgctggatcggtgaggagatt
gaggcgatgcagcgcggcacccgcggccaggcgccgcttgggctggaccagatggcgatt
cttgtgcgcgcctcccaccagatgcgcgcgttcgaggaccggttcctgaccatcggcctg
ccgtaccgggtgatcggcggcccgcgcttctatgagcggatggagatccgcgatgcgatg
gcctatttccgcgtcgtggtgtctccggacgacgacctggcgttcgagcgcatcgtcaac
acccccaagcgcggcctcggcgacaaggcgcagcagaccattcagggcctcgcccgcgaa
aacggtgtttcgctggtggagggcgcccgtctggcggtggagggcggccagatcaagggc
aagggcggcggcgccctgcgcgaactggtcgagggcatcgcccgctggggccgcatggcc
ggcgatcccgatctcacccatatggagctggccgagatcatcctggacgagtccggctac
accgccatgtggcagaacgacaaaacgccggaggcgccgggccgtctggaaaacctcaag
gaactggtgaaggcgctggagtcgtttgagaacctccagggcttcctcgaacacgtcagc
ctggtgatggacaacgacaagcaggacgcagacgagaaggtctcgatcatgaccctgcat
gctgccaagggcctggaattccccgccgtcttcctgccgggctgggaggacgggttgttt
ccctcgcagcgctcgatggatgaaagcggcctgaaaggcttggaggaagagcgccgcctt
gcctatgtcggcatcacccgcgccgaacagatctgcaccatctccttcgccggcaaccgc
cgggtgttcggccagtggcagtcgcagctgccctcgcggttcattgacgaactgccggag
gagcatgtcgaggtgctgaccccgccgggcctttatggcggcggctacggcgcggcggcg
cccggggcctcgatgggggcagggcaggtgcgctcgacgatcgaggaaaagatggcgcag
gcggatggctacaactcccccggctggaaacggatgcaggcccgcgccggccagcgcggt
ctgtcgcagcccaaggaaagcaagcaccaggtgattgacctgaccgccacctccagcttc
accctgggagagcgcgtgttccaccagaaattcggctacggcgccatcaccgggatcgag
ggcgacaagctggaagtggatttcgaaaaggccggcaccaagaaagtggttgcccgcttc
gtctccaccccggacgacgttccgttctga
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