Leisingera aquaemixtae: R2C4_07455
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Entry
R2C4_07455 CDS
T06085
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
laqu
Leisingera aquaemixtae
Brite
KEGG Orthology (KO) [BR:
laqu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
laqu03016
]
R2C4_07455 (rnd)
Enzymes [BR:
laqu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
R2C4_07455 (rnd)
Transfer RNA biogenesis [BR:
laqu03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
R2C4_07455 (rnd)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
QDI75583
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All DBs
Position
1179915..1181072
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AA seq
385 aa
AA seq
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MKTLTTTEELQAFCDAAAQHPYVTVDTEFLRERTYYSKLCLIQLAFAGDGENDAVLVDPL
AEGISLEPLYALFRDESVVKVFHAARQDLEIFWVDASVFPKPLFDTQVAAMVCGFGEQAG
YETLVRKIVKQGLDKTSRFTDWSRRPLSEAQKTYALADVTHLRKIYEFLAAELDKSGRSH
WVAEELQVLTDPATYDIQPQEAWQRVKTRTNSGKFLAVVRELAAFREIYAQSNNVPRNRV
FKDDALVELASTKPRTAAELGGSRLLLREARKGAIAEGILEAVAKGVSCPAEKFPRLDRS
REKLQVNPALADLLRVLLKAKTEAEGVAAKLIAPSADLDAIAAGLRDVPALSGWRREVFG
ADALRLCEGKIGLAANGQAVQVVEL
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccctgaccacgaccgaagaactgcaggccttttgcgatgccgccgcacagcat
ccctatgtcactgtggataccgaatttctgcgcgagcggacctattattccaagctttgc
ctgattcagctggcctttgccggcgatggtgaaaacgacgctgtgctggttgacccgctg
gccgagggcatctcgctggagccgctttatgcgctgtttcgcgacgaaagcgtggttaag
gtgttccatgccgcacgtcaggacctcgagatcttctgggtcgatgcgagcgtctttccc
aagcctctgtttgacactcaggttgcggcaatggtctgcggctttggcgagcaggcgggg
tatgaaaccctggtgcgcaagatcgtcaagcaggggctggacaagacctcgcgctttacc
gactggtcgcgccgcccgctgagcgaggcgcagaagacatatgcgctggcggatgtgacc
catctgcgcaagatctacgaattcctggcggccgagctggacaagagcggccggtcccac
tgggtcgcggaagagctgcaagtgctgaccgatccggcaacgtatgacatccagccgcag
gaggcctggcagcgggtcaagacccgcaccaactcgggcaagttcctggcggtggtgcgc
gagctggcggcgttccgcgagatttacgcgcagagcaacaacgtgccgcgcaaccgggtg
ttcaaggatgacgcgctggtggagctggcctcgaccaagccgcgcactgcggcggagctg
ggcggctctcgtctgctgctgcgcgaggcccgcaaaggcgcgattgccgagggcatcctg
gaggcggtggccaagggcgtcagctgcccggcggagaagttcccccgcctggaccgcagc
agggagaagctgcaggtgaacccggcgctggcagacctgcttcgggtgctcctgaaggcc
aagaccgaggccgagggcgttgcggccaagctgatcgcgccgagcgccgatctggatgcc
atcgctgcgggcctgcgggatgtgccggcccttagcggctggcgccgcgaggtgttcggt
gccgatgcgctgcggctttgcgagggcaagatcggccttgccgccaacggccaggcggta
caggtggtggagctgtaa
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