Leisingera aquaemixtae: R2C4_10040
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Entry
R2C4_10040 CDS
T06085
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
laqu
Leisingera aquaemixtae
Pathway
laqu03030
DNA replication
laqu03430
Mismatch repair
laqu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
laqu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
R2C4_10040
03430 Mismatch repair
R2C4_10040
03440 Homologous recombination
R2C4_10040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
laqu03032
]
R2C4_10040
03400 DNA repair and recombination proteins [BR:
laqu03400
]
R2C4_10040
Enzymes [BR:
laqu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
R2C4_10040
DNA replication proteins [BR:
laqu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
R2C4_10040
DNA repair and recombination proteins [BR:
laqu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
R2C4_10040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
RNase_H_2
Rv2179c-like
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
QDI76072
LinkDB
All DBs
Position
1720549..1721958
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AA seq
469 aa
AA seq
DB search
MLSRLSLRLRIFLFFCLLALGGIAVTGGALWLGYSRAGQPALTDAFIFSGLLSSFAMLGL
SAGVWLLFDENVAKPIERLAAGMRARAHAGVSKELDTHSARYLGDLAAAAEGLAGQLGAS
ALSAAEAIARETEHLEAEKARLAALLTDIPVATVMASPAHQIVLYDGQAAAVLAQEAPPR
LNAPLSDYLDRTGLEAAYGRLVRSGLEVLAEVKSASGSQVFDLRLKPLGGAPGYIILFEG
AHADLAPGDSRPLVYDFALLDTEHAELDSRKLSNLSYVVFDTETTGLLPHKDEIVQIGAL
RVVRNRIIAGEQFATLVDPGTPIPAASTKVHGISDAMVQGAPDIGKAARAFHRFASDAVI
VAHNAPFDMAFLRRHAKRAGVSWDQPVLDTVLLSAVLFGASQSHTLDALCERLEVTIPPA
LRHTAMGDAQATAEVFCKMLPMLEARGLGTFGAVIEETRKHGRLLEDLN
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcacgcctcagcctgcgcctgcggatctttctgttcttctgcctgctggcgctt
ggcggcatcgccgtcaccggcggcgcgctgtggcttggctacagccgcgcgggccagccc
gccctgaccgatgccttcatcttttccggcctgctgagcagctttgccatgctcgggctg
agcgccggggtctggctgctgtttgacgagaacgtcgccaagccgatcgaacggctggcg
gcaggcatgcgcgcccgcgcccacgccggggtgagcaaggagctggacacccacagcgcc
cgctacctgggcgacctggcggccgctgccgaggggctggcgggccagctgggcgcctct
gccctgtccgcggccgaagccatcgcccgcgagaccgagcatctggaagccgagaaagcc
cgccttgcggcgttgctcaccgacattccggttgccaccgtcatggccagcccggcgcat
cagatcgtgctctatgacggccaggccgccgcggtgctggcgcaggaagcgccgccgcgg
ctcaatgcgccgctgtccgattacctggaccgcaccgggctggaggccgcctacggccgg
ctggtgcgcagcgggctggaggttctggccgaggtgaaaagcgccagcggcagccaggtg
tttgatctgcggctgaaaccgctgggcggcgcgccgggttacatcatcctgttcgaaggc
gcccatgcggaccttgcccccggcgactcgcggccgctggtctatgattttgccctgctg
gacaccgagcacgcggaactggacagccgcaagctgtcaaacctcagctatgtggtgttt
gacaccgaaaccaccggcctcctgccgcataaggacgagatcgtccagatcggcgccttg
cgggtggtgcgcaacaggataattgctggcgagcagttcgccacgctggtcgatcccggc
acgccgatccccgccgcctccaccaaggtgcatgggatcagcgatgccatggtgcagggc
gccccggacatcggcaaagccgcccgcgcctttcacaggtttgcctccgatgcggtgatc
gtcgcccataatgcaccattcgacatggcttttttgcgccgccatgccaaacgtgcgggc
gtcagctgggaccagccggttctggataccgtgctgctgagcgcggtgctgttcggcgcc
tcgcagagccacacgctggatgcgctgtgcgagcggctggaagtgaccatcccgcctgcc
ctgcgccataccgcaatgggggatgctcaagccacggcagaggtgttctgcaaaatgctg
ccaatgctggaggcgcgcggcctcggcacctttggcgcggtgattgaggagacccgcaag
cacggacgcctgttagaggacttgaattag
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