Leisingera aquaemixtae: R2C4_11540
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Entry
R2C4_11540 CDS
T06085
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
laqu
Leisingera aquaemixtae
Brite
KEGG Orthology (KO) [BR:
laqu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
laqu03009
]
R2C4_11540
Enzymes [BR:
laqu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
R2C4_11540
Ribosome biogenesis [BR:
laqu03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
R2C4_11540
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S4
PseudoU_synth_2
SYY_C-terminal
S4_2
Motif
Other DBs
NCBI-ProteinID:
QDI76356
LinkDB
All DBs
Position
2012783..2013874
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AA seq
363 aa
AA seq
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MARGMSKTPASPKGKPAPKSQPRKATAKPEGAAPEGDRIAKVLSRAGVASRREAERMIAE
GRVSVNGKKIDSPALNVTAKDRISIDGQPLPEAEAPRMWLYYKPIGLVTSNSDEKGRTTI
FDELPEDMPRVMTVGRLDLNSEGLLLLTNDGGIKRKLELPATGWLRRYRVRINGRPKDED
FAPLRKGLVIEGERFQPMTVSLDRQQGANAWLTVGLREGKNREIRRAMEDIGFSVNRLLR
VSYGPFQLGNLKPGEVEELRARVVRDQLGLAEEEEIPAARPTRARGGKPAGKPMGKPAGK
PMGKPAGKPMGKPAGKRVGKQAAQPSGKQGNPGRTAGKAPPARGTRPDQRGGGKRPAGKN
PRR
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atggcacgaggcatgagcaaaacacccgcatcccccaagggcaaaccggccccgaaatcc
cagccccgcaaggccaccgcaaaaccggagggcgccgcgcctgagggcgaccgcatcgcc
aaggtcctgtcgcgcgcaggcgtcgcctcgcgccgcgaggctgagcgcatgatcgccgag
ggccgcgtgtcggtgaacggcaagaagatcgacagcccggcgctgaacgtgaccgcgaag
gaccgcatcagcattgatggccagcccctgccggaggcggaggcgccgcggatgtggctg
tattacaagcccatcgggctggtgacatcgaacagcgacgagaagggccgcacgacaatc
tttgacgagctgccggaagacatgccgcgggtgatgacggtcggccgccttgacctcaac
tccgaagggctgctgctgctgaccaatgacggcggcatcaagcgcaagctggagctgcct
gccaccggctggctgcgccgctacagggtacggatcaacggccgccccaaggacgaggat
tttgcccccctgcgcaagggcctggtgatcgagggcgagaggttccagccgatgaccgtg
tcgctggaccggcagcagggcgccaacgcctggctgaccgtcggcctgcgcgaaggcaag
aaccgcgagatccgccgcgcgatggaggatatcggcttcagcgtgaaccggctgctgcgg
gtatcttacgggccgttccagctgggcaatctgaaaccgggcgaggttgaggaactgcgc
gcccgcgtggtgcgcgaccagctggggctggcggaggaagaggaaataccggcggcccgc
ccgacccgcgcgcgcggcggcaagcccgcaggtaaaccgatgggcaagcctgcaggtaaa
ccgatgggcaagcctgcaggcaaaccgatgggcaagcccgcaggcaaacgggtcgggaaa
caggccgcgcagccttcgggcaagcagggcaacccgggcagaaccgcaggcaaagctccg
cccgcacgcggcacccggccggatcagcgcggcggcggcaaacggcccgccggcaagaat
ccccgccgctga
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