Leisingera aquaemixtae: R2C4_13060
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Entry
R2C4_13060 CDS
T06085
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
laqu
Leisingera aquaemixtae
Pathway
laqu03030
DNA replication
laqu03430
Mismatch repair
laqu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
laqu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
R2C4_13060 (dnaE)
03430 Mismatch repair
R2C4_13060 (dnaE)
03440 Homologous recombination
R2C4_13060 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
laqu03032
]
R2C4_13060 (dnaE)
03400 DNA repair and recombination proteins [BR:
laqu03400
]
R2C4_13060 (dnaE)
Enzymes [BR:
laqu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
R2C4_13060 (dnaE)
DNA replication proteins [BR:
laqu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
R2C4_13060 (dnaE)
DNA repair and recombination proteins [BR:
laqu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
R2C4_13060 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
Motif
Other DBs
NCBI-ProteinID:
QDI76635
LinkDB
All DBs
Position
complement(2325433..2328945)
Genome browser
AA seq
1170 aa
AA seq
DB search
MTSSPRFIHLRTHTEYSLLEGAVRLKKLPDLCKTHGMPAIAVTDTNNLFSALEFSVSASG
AGVQPIIGCQVDLRFTEPAPGERPKPPAPLVLLAQSEAGYEHLMKLNSCLYLRQGGELPH
VTLEELESHSEGVICLSGGPDGPVGRLLQMGQRPAAEALMQRLKAIFPDRLYVELQRHPG
EHGQPEAEKQTERGHVEMAYAMGLPLVATNDVYFPSTEMFEAHDAMICIAEGAYVDQVEP
RRRLTAQHYFKSQEEMVALFADLPEAIENTVEIAKRCAFMAYRRDPILPKFADDEVAELR
RIANEGLQQRLAVIPHAVSVEEYQARLDFELGIIEGMGFPGYFLIVADFIQWAKDHDIPV
GPGRGSGAGSLVAYALTITDLDPLRYSLLFERFLNPERVSMPDFDIDFCMDRREEVIKYV
QEKYGRDKVGQIITFGALLSKAAVRDMGRVLQMPYGQVDRLSKLIPVEGVKPMSIADALK
EEPRLSEEARNEPVVDRLLTYGQQVEGLLRSAGTHAAGVVIGDRPLDALVPLYRDPRSDM
PATQFNMKWVEQAGLVKFDFLGLKTLTVIQNAMDLIFQSGRDLHIAADGTQLYEPPEGAE
NQINAIPLDDKVTYDLYSRAKTVAVFQVESTGMMDALKRMKPTCIEDIVALVALYRPGPM
ENIPVYCEVKNGQREITSVHPLIDHILEETQGIIVYQEQVMQIAQVMANYTLGGADLLRR
AMGKKIKEAMDAERPKFEKGAAENGVPAKKASEVFDLLEKFANYGFNKSHAAAYAVVSYQ
TGWLKANHPVEFMAGVMNCDIHLTDKLAIYFEEVKKGLGLKYVPPCVNRSLATFNVVNGE
LVYALGALKNVGLDVMRLVTEARKEGGYDRPFVNVFDFARRVNLKKVGKRPLEMLARAGA
FDQLDSNRRRVFESLGALVDYSAAVHDQRNSNQVSLFGEAGEDLPEPRLPNVPDWLPAER
LSEEFKAIGFYLSGHPLDDYMPALKRKKVMTLDEVTAKAERGPFMAKMAGVVAGRQERKS
ARGNRFAFAQLSDPSGAYEVTLFSEVLEKSREFLETGAKVVITAEATMESDQLKLLVRSV
GPVDSAIADAGRSSLRVYLSDAGAVGTVAQVLEDAKAAARNASRGEVYMYLQDPGLPGDV
EMDLGQAFPINPQIKGALKSLDGVMDVEEI
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgacaagctctccccgattcattcatctgcgcacccataccgaatactctctgctggag
ggggccgtgcggctgaagaagctgccggacctgtgcaagacgcacggcatgcccgcgatt
gcggtgaccgacaccaacaacctgttctcggcgctggagttttcggtgtcggcgagcggc
gccggggtgcagccgatcatcggctgccaggtcgatctgcggttcaccgagccggcgccc
ggcgaaaggcccaagccgcccgcgccgctggtgctgctggcccagagcgaggccgggtat
gagcatctgatgaagctgaactcttgcctgtatctgcggcaggggggcgagctgccgcat
gtgacgctggaggagctggagagccattccgaaggcgtgatctgcctgagcggcgggccg
gacgggccggttgggcggctgttgcagatgggccagcgcccggcggcggaagcgttgatg
cagcggctgaaggcaatcttcccggaccgtttgtatgtggaactgcagcgccatccgggt
gagcacggccagccggaggcggagaaacagacagagcgcggccatgtggaaatggcctat
gccatgggcctgccgctggtcgccaccaatgacgtctatttccccagcacggagatgttc
gaggcgcatgacgcgatgatctgcatcgcggagggcgcctatgtcgaccaggtggagccg
cggcggcggctgaccgcgcagcattacttcaaaagccaggaggaaatggttgcgctgttt
gccgacctgcccgaggcgattgagaacacggtggagatcgccaagcgctgcgccttcatg
gcctataggcgcgacccgatcctgccgaagttcgccgatgacgaggtggccgagctgcgc
cgcatcgccaacgagggcctgcagcagcgtctggcggtgatcccgcacgcggtgagcgtc
gaggaataccaggcgcggctcgacttcgagctgggcatcatcgagggcatggggtttccc
ggctacttcctgatcgttgccgactttatccagtgggccaaggaccacgacattccggtg
gggccggggcgggggtccggtgcgggctctttggtggcctatgcgctgacgattaccgac
cttgatccgctgcggtattcactgctgttcgaacgcttcttgaacccggaacgggtgtcg
atgcctgacttcgacatcgacttctgcatggaccgccgggaagaggtgatcaaatacgtg
caggagaaatacggcagagataaagtcgggcagatcatcacctttggcgcgcttctgtcc
aaggcggcggtgcgcgacatggggcgggttctgcagatgccctatggccaggtggaccgg
ctgtcgaagctgatcccggtcgagggcgtgaagccgatgtccatcgccgacgcgctgaag
gaagagccgcggctgagcgaggaagcccgcaatgagccggtggtggaccggctgctgacc
tatggccagcaggtggaggggctcttgcgctctgccggtactcacgcggcgggcgtggtg
atcggcgaccggccgctggatgcgctggtgccgctttaccgcgatccgcggtccgacatg
cctgcgacccagttcaatatgaaatgggtggagcaggcggggctggtgaagttcgacttc
ctcggcctcaagaccctgaccgtcattcagaacgcgatggatctgatcttccagtcgggg
cgcgacctgcatatcgccgccgatggcacccagctttatgagccgccggagggggcggag
aaccagatcaacgccattccgttggatgacaaggtcacctacgacctgtattcccgcgcc
aagacggtggcggtgttccaggtggaatccaccggcatgatggatgcgctgaagcgcatg
aagcccacctgtatcgaggacatcgtggcgctggtggcgctgtaccgtcccggcccgatg
gaaaacatcccggtctattgcgaggtgaagaacggccagcgcgagatcacctctgtccac
ccgctgatcgaccacattctggaggaaacccaaggcatcatcgtctatcaggaacaggtg
atgcagatcgcccaggtgatggcgaactacacgctgggcggtgcggacctgttgcgccgg
gcgatgggtaagaagatcaaggaggcgatggacgccgagcgcccgaagttcgaaaagggc
gcggcggaaaacggggttcccgccaagaaggcctcggaggtgttcgaccttctggagaaa
ttcgccaactacggtttcaacaaatcgcacgcggcggcctatgcggtggtgagctatcag
accggctggctcaaggcgaaccacccggtggagttcatggcgggcgtcatgaactgcgat
atccatctgaccgacaagctggcgatctacttcgaggaagtgaagaaggggctggggctg
aaatacgtgccgccctgcgtcaaccgctcgctggcgaccttcaacgtggtgaacggcgaa
ctggtctatgcgctgggcgcgctgaagaacgtcggtttggacgtgatgcggctggtgacc
gaggcgcgcaaggagggcggatatgacaggccctttgtcaatgtcttcgactttgcccgc
cgggtgaatctcaagaaggtcggcaagcggcccctggagatgctggcaagggcgggggcc
tttgaccagctcgattccaaccgccgccgggtgtttgagagccttggcgcgctggtcgat
tactccgccgcggtgcatgaccagcggaactcgaaccaggtgtcgctgttcggcgaggcg
ggcgaggacctgccggagccgcggctgcccaatgtgccggactggctgccggccgagcgg
ctgagcgaggagttcaaggcgattggcttctacctgtcgggccatccgttggacgattat
atgccggcgctgaaacgcaagaaggtgatgacgctggacgaggtcaccgccaaggccgag
cgcgggcccttcatggccaagatggccggtgtcgtggccgggcggcaggagcggaagtca
gcccgcggcaaccgctttgcgtttgcccagctcagcgacccttcgggcgcctatgaggtg
acgctgttctccgaggtgctggagaagtcccgcgagttcctggagaccggcgccaaggtg
gtgatcaccgccgaggcgacgatggagagcgaccagctgaaactgctggtgcgctctgtc
gggccggtggacagcgccattgcagatgccgggcgcagttcgctgcgggtgtatctgagc
gatgccggcgccgtcggaaccgtggcgcaggtgctggaggatgccaaggcggcggcccgc
aacgcatcgcgcggcgaggtctacatgtacctgcaggaccccggcctgcccggtgacgtg
gagatggatctgggccaggcgttcccgatcaatccgcagatcaagggggcgctgaaatcg
ctggacggcgtgatggatgtagaggagatttga
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