Leisingera aquaemixtae: R2C4_17130
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Entry
R2C4_17130 CDS
T06085
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
laqu
Leisingera aquaemixtae
Brite
KEGG Orthology (KO) [BR:
laqu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
laqu03016
]
R2C4_17130 (truB)
Enzymes [BR:
laqu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
R2C4_17130 (truB)
Transfer RNA biogenesis [BR:
laqu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
R2C4_17130 (truB)
Prokaryotic type
R2C4_17130 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
QDI77390
LinkDB
All DBs
Position
complement(3146046..3146957)
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AA seq
303 aa
AA seq
DB search
MARKRKGRDISGWLVVDKPAGLTSTAVVNKVRWALDAKKAGHAGTLDPEATGVLAVALGE
ATKTVPYITDALKAYTFTVRLGQATNTDDAEGEVIAQSDARPTDEQIKEALLPFLGEIMQ
VPPKFSAVKIDGQRAYKLARDGEDVQIEARPLWVEELIMLDRPDADHVVLEMTCGKGGYV
RSIARDLGAALGCYGHVKELRRIWSGPFDAEDGISLERIDELAKSPELDQYLRPLEEGLA
DLPELKCTPQGAVRLRNGNPGMVMAADVEYGDEAWASLDGKAVAVGIYKSGELHPSRVFV
EPE
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcaaacgcaaagggcgcgatatttccggctggctggtggtggataagcctgcg
gggctgacctcgacagcggttgtgaacaaggtgcgctgggcgctggatgccaagaaggcc
ggccatgcgggcaccctggaccccgaagcaaccggtgttctggccgtggcgctgggcgag
gcgaccaagaccgtcccctatatcaccgacgcgctgaaggcctataccttcacggtgcgg
ctgggccaggcgaccaacaccgatgacgccgagggcgaagtgatcgcgcaaagcgatgcc
cgccccaccgacgagcagatcaaggaggcgctgctgccgttcctgggcgagatcatgcag
gtgccgcccaagttctccgccgtgaaaattgacggccagcgcgcctataagctcgcccgc
gatggcgaagatgtgcaaatcgaggcccggccgctgtgggtggaagaactgatcatgctg
gaccgccccgacgcggaccacgtggtgctggaaatgacctgtggcaagggcggctatgtg
cgctcgatcgcccgcgacttgggggcggctctgggctgttatggccacgtcaaggaactg
cgtcggatttggtccggcccgtttgatgccgaagacggcatctcgctggagcggatcgac
gaactggcgaaatcgccggaactcgaccagtacctgcggcccctggaggaaggcctggcc
gatctgccggagctgaaatgcaccccgcagggagccgtgcggctgcgcaatggcaacccg
ggcatggttatggccgcggatgtggagtacggcgacgaagcctgggcctcgctggacggc
aaggcggtggccgtgggtatctataaatcgggtgagctgcaccccagccgggtgtttgtg
gagccggagtga
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