Leisingera aquaemixtae: R2C4_17255
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Entry
R2C4_17255 CDS
T06085
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
laqu
Leisingera aquaemixtae
Pathway
laqu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
laqu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
R2C4_17255 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
laqu03400
]
R2C4_17255 (mutM)
Enzymes [BR:
laqu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
R2C4_17255 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
R2C4_17255 (mutM)
DNA repair and recombination proteins [BR:
laqu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
R2C4_17255 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Extensin-like_C
Motif
Other DBs
NCBI-ProteinID:
QDI77414
LinkDB
All DBs
Position
complement(3172814..3173665)
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AA seq
283 aa
AA seq
DB search
MPELPEVETVKRGLAPAMEGAVIVKAAVNRPDLRWPFPPAMAQRLTGARVNALRRRSKYI
LADLDTDETLLIHLGMSGRMTVSGDPLGRFVHEHPQAEKHDHVVLDMDNGARITFNDPRR
FGAMDLLETAAADSHKLLSVLGPEPLGNDFHEDHLIAAFKGRNTPVKSALLDQGIIAGLG
NIYVCEALFRAGISPRRKAGQIAAHRVAALVPIIRQVLEDAIRAGGSSLKDFRQASGELG
YFQHSFDAYGREGEPCRREGCAGSIARITQSGRSTFYCVKCQR
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattgcccgaggtcgagacagtgaaacgcggtttggcgcctgcgatggagggc
gcggtcattgtgaaggctgccgtgaaccgcccggatctgcgctggccgtttccgccagcg
atggcacagcggcttacgggcgcgcgggtcaatgccctcaggcggcggtcgaaatacatt
ctggcagatctggatacggacgaaactctgctgatccacctgggcatgtcggggcggatg
acggtctccggggatccgctggggcggttcgtgcatgagcatccgcaggcagagaaacat
gaccatgtggtgctggacatggacaatggcgcccgtatcaccttcaacgatccgcgccgg
ttcggagcgatggatctgctggagactgcggctgcggattctcacaagctgctgtcggtg
ctggggccggaacccttgggcaatgacttccacgaggatcacctgatcgccgctttcaaa
gggcgcaacacgccggtcaaatcggcattactggatcagggaatcatcgcgggccttggt
aacatctatgtctgcgaagcgctcttccgtgcgggaatttcgccacgccgcaaggccggg
cagattgccgcgcatcgggtggcggcgctggtgccaatcatccggcaagtgctggaggac
gccattagagcaggtggttcttcgctcaaggattttcggcaagcctctggcgagcttgga
tattttcagcacagttttgatgcctacgggcgcgagggcgaaccctgccggcgggaaggt
tgcgcagggtcaattgccagaatcacccaatcgggacgctccaccttctactgtgtaaag
tgccaaagatag
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