Leisingera aquaemixtae: R2C4_17435
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Entry
R2C4_17435 CDS
T06085
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
laqu
Leisingera aquaemixtae
Pathway
laqu00300
Lysine biosynthesis
laqu01100
Metabolic pathways
laqu01120
Microbial metabolism in diverse environments
laqu01230
Biosynthesis of amino acids
Module
laqu_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
laqu00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
R2C4_17435 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
laqu01002
]
R2C4_17435 (dapE)
Enzymes [BR:
laqu01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
R2C4_17435 (dapE)
Peptidases and inhibitors [BR:
laqu01002
]
Metallo peptidases
Family M20
R2C4_17435 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
QDI77446
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Position
3208402..3209553
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AA seq
383 aa
AA seq
DB search
MPQTDPARLTADLIRCPSVTPEEGGALVLLEKLLSTAGFDCTRTDRGEVSNLFARWGAKG
HAKTFGFNGHTDVVPLGDEAAWTMPPFGAEEKDGFMYGRGATDMKSGVAAFAAAAVDFVK
ETPPDGAIILTITGDEEGDAEDGTTALLDYMDREGEKMSVCLVGEPTCPDEMGEMIKIGR
RGSLTAWFTVTGVQGHSAYPHRANNPLNAMARLMDRLASHELDQGTEHFDASTLAVVTID
TGNTATNVIPAQSRATVNIRFNDAHTGASLTEWLQDEADKVAAEFGLEIAVQVKISGESF
ITPPGPLSDLVAEAVEAETGRKPELSTTGGTSDARFVKDHCPVVEFGLVGKTMHQVDERV
EVAQIHQLKAIYTRILQDYFAKA
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgccgcaaaccgaccccgcccgtctgaccgccgatctgatccgctgcccttcggtcacg
ccggaagaaggcggcgcgctggtgcttctggaaaagctgctgagcacggcaggctttgac
tgcacacgcaccgaccgcggcgaagtttccaacctgtttgcccgctggggcgccaagggg
cacgccaaaaccttcggcttcaacggccataccgatgtggtgcctttgggggatgaggcc
gcctggaccatgccgccctttggcgcggaagagaaagacggcttcatgtacgggcgcggt
gccaccgacatgaaatcgggcgttgccgcctttgccgccgccgccgtggatttcgtcaag
gagacaccgccggacggcgccatcatcctgaccatcaccggcgacgaggaaggcgatgcg
gaggacggcaccaccgcgctgctggattatatggaccgcgagggcgagaagatgtcggtc
tgcctggtgggcgaacccacctgccccgatgagatgggcgagatgatcaagatcggccgc
cgcggatcgcttacggcctggttcacggtgaccggcgtgcagggtcattccgcctatccc
caccgcgccaacaacccgctgaacgcaatggcgcggctgatggaccgcctggcgagccat
gagctggaccagggcaccgagcatttcgacgcgtccaccctggcggttgtcaccatcgac
accggcaacaccgccaccaacgtgatcccggcgcagagccgcgccaccgtgaatatccgc
ttcaacgacgcccacaccggcgccagcctgacggaatggctgcaggatgaggcggacaag
gtggcggcggagttcgggctggagatcgctgtgcaggtgaaaatctccggcgagagcttt
atcacaccgccaggcccgctgtcggatctggtcgccgaagccgttgaagcggagacaggc
cgcaagccggagctgtcgaccaccggcggcacctcggacgcgcggtttgtaaaggaccat
tgcccggtggtggagttcgggctggtgggcaagacgatgcaccaggtggatgagcgggtc
gaggtcgcgcagattcatcagctgaaggccatctatacccgcattctgcaggactatttt
gccaaggcgtga
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