Leisingera aquaemixtae: R2C4_19290
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Entry
R2C4_19290 CDS
T06085
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
laqu
Leisingera aquaemixtae
Pathway
laqu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
laqu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
R2C4_19290 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
laqu03019
]
R2C4_19290 (recQ)
03400 DNA repair and recombination proteins [BR:
laqu03400
]
R2C4_19290 (recQ)
Enzymes [BR:
laqu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
R2C4_19290 (recQ)
Messenger RNA biogenesis [BR:
laqu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
R2C4_19290 (recQ)
DNA repair and recombination proteins [BR:
laqu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
R2C4_19290 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
Rhodanese
SAM_GIDA_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
QDI77791
LinkDB
All DBs
Position
3585422..3587488
Genome browser
AA seq
688 aa
AA seq
DB search
MTAPASPAELPGASPILREIFGFDAFRPGQEEIVDAVTAGENVLAIMPTGGGKSLCYQLP
ALLRDGITVVISPLIALMRDQVRALQEAGVTAGALTSGNTDEETEMVWQAIEAGRLKLLY
MAPERLASGAAMGMLRRIGVSLIAVDEAHCVSQWGHDFRPDYLRIGELRRALDVPLAAFT
ATADQETQEEIVQKLFDGEAPRSFLRGFDRPNIHLAFGAKDSPRRQILEFAAARKGQSGI
VYCGTRAKTEALSAALRDAGHSACFYHGGMEAEDRRIVETRFAREDGLIVVATVAFGMGI
DKPDIRWVAHADLPKSIEAYYQEIGRAGRDGAPAETLTLFGPDDIRLRRSQIDEGLAPPE
RRAADHARLNALLGLAEALHCRRQKLLGYFGEAAEPCGNCDLCDTPADVFDGTTVVRKAL
SAVLRTEEWFGSGHLIDILLGADNERIRAKRHDELSVYGCGKEFGKRQWQAVFRQMMGHD
LLRPDPERHGALRFTEAALPILRGEQTIELRRDTITSADRRPAVKALVSEEDAPLLSALK
AKRRALAEAQKVPAYVIFPDRTLIEMAEMRPETLDQMARINGVGAKKLERYGDDFLGVIT
GAAEQLHPARRKLAGRESGSVYDSLLEVQAQLARGACGTLKPLTCSASLLAKVAQMRPED
ETGVTKLLGERRAERFAAAFLDVLRGAG
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgacagccccggcatccccggcagaactccctggcgcgtccccgatcctgcgcgagatc
ttcggcttcgacgccttccgccccggccaggaagagatcgtcgacgcagtaaccgccggg
gaaaacgtgctggcgatcatgcccaccggcggcggcaagtcgctgtgctaccagctgccc
gcgctgctgcgcgacggcatcaccgtggtgatctcccccctcattgccctgatgcgcgac
caggtccgcgccctgcaggaggccggcgtcacagcaggcgcgctcacctccggcaatacc
gatgaagagaccgaaatggtctggcaggcgattgaggccgggcggctcaagctcctctac
atggcgcccgaacgcctcgcctcaggtgccgcgatggggatgctgcgccgcatcggcgtc
agcctgatcgcggtggacgaggcgcattgcgtcagccagtggggccacgacttccgcccc
gactacctgcgcatcggcgagctgcgccgcgccctggacgtgccgctggccgccttcacc
gccaccgccgaccaggaaacccaggaagaaatcgtccagaaactgttcgacggcgaggcc
ccccgcagcttcctgcgcggtttcgaccggcccaacatccacctggcctttggcgcaaag
gacagcccccgccgccagatcctggagttcgccgccgcccgcaaggggcaatccggcatt
gtctactgcggcacccgcgccaagaccgaagcgctgtccgccgctctgcgcgacgcaggc
cacagcgcctgtttctaccacggcggcatggaggccgaggaccgccgcatcgtcgaaacc
cgcttcgcccgcgaggacgggctgatcgtggttgccaccgtcgcctttggcatgggcatc
gacaagcccgacatccgctgggtcgcccacgccgacctgccgaaaagcatcgaagcctac
taccaggaaatcggccgcgccggccgcgacggcgcgccagccgaaaccctcaccctgttc
ggccccgacgacatccgcctgcgccgctcgcagatcgacgagggcctcgccccgcccgaa
cgccgcgccgccgaccacgcccgcctgaacgctctccttggcctcgccgaggcgctgcat
tgccgccgccagaaactgctgggctattttggcgaggcggcagagccttgcggcaactgc
gacctctgcgacacgccagcggatgtgttcgacggcaccaccgtggtgaggaaggcgctg
tcagcggtgctcaggaccgaggaatggttcggctccggccatctgatcgacattctgctg
ggggccgacaacgagcgcatccgcgccaagcgccatgatgagctgtcggtctatggctgc
ggcaaggaattcggcaagcgccagtggcaggcggtgttccggcagatgatgggccacgac
ctcttgcgccccgaccccgaacgccacggcgccctgcgctttaccgaagccgcgctgccg
atcctgcgcggcgagcaaaccattgagctgcgccgcgacaccatcacatccgcagaccgc
cgcccggcagtgaaggcgctggtctccgaggaggacgcgccgctgctgtcggccttgaag
gcaaagcgccgcgccctggccgaggcgcagaaagtgccggcctatgtgatcttccccgac
cgcaccctgatcgagatggcagagatgcgcccggaaacgctggaccagatggcccgcatc
aatggcgtcggcgccaagaagctggaacgctacggcgacgacttcctgggggtgatcacc
ggcgcggcggagcagctgcatcccgcgcggcgcaagctggcggggcgggagtccggctct
gtctacgattcgctgctggaagtgcaggcgcagctggcgcgcggcgcgtgcggcacgctg
aaaccgctcacctgttctgcgtcgctcctggccaaagtggcgcagatgcgcccggaggac
gagaccggcgtcaccaaactgctgggggagcgccgcgccgaacgtttcgcagcggcgttt
ctggacgtcttgcgcggcgcgggctag
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