KEGG   Leisingera aquaemixtae: R2C4_19365
Entry
R2C4_19365        CDS       T06085                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
laqu  Leisingera aquaemixtae
Pathway
laqu03030  DNA replication
laqu03410  Base excision repair
laqu03420  Nucleotide excision repair
laqu03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:laqu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    R2C4_19365 (polA)
   03410 Base excision repair
    R2C4_19365 (polA)
   03420 Nucleotide excision repair
    R2C4_19365 (polA)
   03440 Homologous recombination
    R2C4_19365 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:laqu03032]
    R2C4_19365 (polA)
   03400 DNA repair and recombination proteins [BR:laqu03400]
    R2C4_19365 (polA)
Enzymes [BR:laqu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     R2C4_19365 (polA)
DNA replication proteins [BR:laqu03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     R2C4_19365 (polA)
DNA repair and recombination proteins [BR:laqu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     R2C4_19365 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     R2C4_19365 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc HHH_5 DNA_polI_exo1 Ribosomal_L12_N
Other DBs
NCBI-ProteinID: QDI77806
LinkDB
Position
complement(3609291..3612101)
AA seq 936 aa
MSGTTFGKGCHLHLIDGSAFIFRAYHALPPLTRKSDGLPIGAVAGFCNMLFKQVEDNKGP
DAPTHVAVIFDHSGMSFRNEMYDQYKANRPPAPEDLVPQFPLTREATKAFNIACKEVEGF
EADDIIATLACQARAAGGRVTIISSDKDLMQLVGGGVEMLDAMKNKRIDSDGVVEKFGVG
PDRVVDVQALAGDSVDNVPGAPGIGIKTAALLINEFGSLEELLDRAEEIKQPKRRQTLIE
MREQIELSKKLVQLDCDMELDFTLDDLEVMEPDADTLMTFLTEMEFRTLSKRMADRLGVE
APAIPEAPAAAPVSAAAEAPEAVPFDKEKYECVRDAAALQVWVDRIRERGWVAVDTETTG
LDEMVVDLVGISLCVEAGEACYIPLAHKAGGDDLFGGEGLSEGQMPLEEAVAMLKPVLED
PAILKIGQNMKYDAKILHRYGVDVAPIDDTMLMSYALHAGLHGHGMDALSERYLDHTPIP
IKPLLGSGKSAITFDRVPIEDAVPYAAEDADITLRLWQTFKPQLHQERVTTVYETLERPL
VPVLAEMERNGIKVDRDTLSRMSNAFAQKMAGLEAEIHELAGETFNVGSPAQLGEILFDK
MGLEGGKRGKNGKYSTGADILEDLATEHDLPRRVLDWRQLSKLKSTYTDALQDHINPDTG
RVHTSYAQTGASTGRMASTDPNLQNIPVRSEEGRRIREAFVAEEGNVLLSLDYSQIELRI
LAHMAGIETLQQAFAEGQDIHALTASEMFGVPLEEMTPEIRRQAKAINFGVIYGISGFGL
ARNLRIPRKDAQGFIDRYFERFPGIRKYMDSTVEFAKEHGYVQTLFGRKIHTAEINAKGP
KAGFAKRAAINAPIQGTAADVIRRAMIRMPEAIAHLPARMLLQVHDELLFEVPEAAVEET
IAAAREVMENAADPAVHLDVKLVVDAGRGKNWAEAH
NT seq 2811 nt   +upstreamnt  +downstreamnt
atgagcgggacaacattcggcaagggctgccatctgcatctgatcgacggctcggccttc
atcttccgcgcctatcacgcgctgccgcccttgacccgcaaatccgacgggctgccgatt
ggggccgtggcgggcttttgcaacatgctgttcaagcaggtggaggacaacaagggcccg
gatgcgccgacccatgtggcggtgatctttgaccattccggcatgtccttccgcaacgag
atgtacgaccagtacaaggccaaccgcccgcccgcgccggaggatctggtgccgcagttc
ccgctgacccgcgaggcgaccaaggccttcaacatcgcctgcaaggaagtcgaaggcttc
gaggccgatgacatcatcgccacgctggcctgccaggcgcgcgcggccggcggtcgggtg
acgatcatctcgtcggacaaggacctgatgcagctggtcggcggcggcgtcgagatgctg
gatgcgatgaagaacaagcgcatcgacagcgacggcgtggtggagaagttcggcgtcggc
cccgaccgggtggtggacgtgcaggcgctggcgggcgactcggtcgataacgtgccgggc
gcgccggggatcgggatcaagaccgccgcgctgctgatcaacgaattcggctcgcttgag
gaattgctggaccgcgcggaagagatcaagcagcccaagcgccgccagacgctgatcgag
atgcgggagcagatcgagctgtcgaagaagctggtgcagctggactgcgatatggagctg
gacttcaccctggacgatctggaggtgatggagccggacgcggacaccctgatgaccttc
ctgaccgagatggagttccgcaccctgtccaagcgcatggccgaccggctgggcgtggag
gcgccggcaatcccggaggcgcccgccgcagcgcccgtttccgcggcggcagaggcgccg
gaagccgtgccctttgacaaggaaaaatacgaatgcgtccgcgacgccgccgccctgcag
gtctgggtggaccgcatccgcgagcgcggctgggtggcggtggacaccgagaccacgggt
ctggatgagatggtcgtcgatctggtcggcatctcgctgtgcgtggaggcgggcgaggcc
tgctatatccccttggcgcataaggccgggggcgatgacctgttcggcggcgaaggcctg
tcggaggggcagatgccgctggaagaagcggtcgcgatgctgaaaccggttctggaggat
ccggcgatcctgaagatcggccagaacatgaaatacgacgccaagatcctgcaccgctac
ggggtggatgtggcgccgatcgacgacaccatgctgatgtcctatgcgctgcacgcgggc
ctgcacgggcatggcatggatgcgttgtcggagcgctatctggatcacacgccgatcccg
atcaagccgctcttgggcagcggcaaatcggcgatcacctttgaccgggtgccgattgag
gacgcggtgccttatgccgccgaggacgccgacatcaccctgcgcctgtggcagaccttc
aagccgcagctgcatcaggagcgggtgacgacggtctatgaaacgctggagcggccgctg
gtgccggtgctggcggagatggagcgcaacggcatcaaggtggaccgcgatacgctttcc
cgcatgtccaatgcctttgcccagaagatggccggtctggaagcggagatccatgaactc
gcgggcgagaccttcaacgtcggctcgcctgcgcagctgggcgagatcctgttcgacaag
atggggctggaaggcggcaagcgcggcaaaaacggcaagtactccaccggcgccgatatc
ctggaggatctggcgaccgaacatgacctgccccggcgggtcttggactggcggcagctc
agcaagctgaagtcgacctacacggatgcgctgcaggaccatatcaatccggacaccggg
cgggtgcatacatcctatgcccagaccggggcaagcaccgggcgcatggcctcgaccgat
ccgaacctgcagaatatccccgtccgctccgaagaggggcggcgcatccgcgaggcgttt
gtggcggaagagggcaatgtgctgctgtcgctcgactacagccagattgagctgcggatc
ctggcccatatggccgggatcgagacgctgcagcaggcctttgccgaggggcaggacatt
cacgccctgaccgcctcggagatgttcggggtgccgctggaggagatgacgccggaaatc
cgccgtcaggccaaggcgatcaacttcggtgtgatctacggcatttccggctttggcctg
gcgcgcaacctgcgcatcccgcgcaaagacgcgcagggcttcatcgaccgctatttcgag
cgcttcccgggcatccgcaagtacatggactccaccgtggagttcgccaaggagcacggc
tatgtgcaaaccctgttcgggcgcaagatccacaccgcggagatcaacgccaaggggccg
aaggcgggctttgccaagcgcgcggcgatcaacgcgccgatccagggcaccgcggcggat
gtgatccgccgggcgatgatccggatgccggaggcgattgcccacctgcccgcgcggatg
ctgctgcaggtgcatgacgaacttttgttcgaagtgccggaggcggccgtggaggagacc
atcgccgccgcccgcgaagtgatggaaaacgccgccgatccggcggtgcatctggacgtg
aaactggtggtggatgcgggccgcgggaagaactgggccgaggcgcattga

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