Candidatus Liberibacter americanus: lam_009
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Entry
lam_009 CDS
T02902
Symbol
rnd
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
lar
Candidatus Liberibacter americanus
Brite
KEGG Orthology (KO) [BR:
lar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lar03016
]
lam_009 (rnd)
Enzymes [BR:
lar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
lam_009 (rnd)
Transfer RNA biogenesis [BR:
lar03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
lam_009 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AHA27397
UniProt:
U6B6M8
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All DBs
Position
complement(9353..9976)
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AA seq
207 aa
AA seq
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MSNIRVHNGDIPVECIDMYTDAIAVDTETLGLVPRRDRLCVVQLSPGDGTADIIQISKDQ
KNAPNLEIMLSDRKREKIFHYGRFDIAVLLNKFGFVVAPVFCTKIASRLVRTYTNYHGLK
DNLKEMLGVEISKSKQSSEWDADVLSYEQLEYAASDVIYLHALRKKLIEKLEKLDRMHLA
NSCFDFIASRAELDLLGWDNIDIFAHS
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatatacgtgttcataatggtgatatcccagtcgaatgtattgatatgtatact
gatgctattgctgtcgatacggaaacacttggcttggttccacgccgagataggctttgt
gttgttcagctatctccaggagatgggactgcagatattatacagatttctaaggatcaa
aaaaatgcccctaatcttgagattatgctctcagatcgaaagcgagaaaaaatttttcat
tatggtcgttttgatatagcagtattattgaataaatttggttttgtagttgctccagtt
ttttgcacaaaaattgcttctcgtttagtgagaacttacactaattatcatggacttaag
gataatttaaaagaaatgttaggggttgagatatcaaagtcaaaacaatcatcagaatgg
gatgctgatgttctatcttatgaacaactagaatatgctgcttcagatgttatttatctt
catgcgttgcgcaaaaaattaattgaaaagcttgagaaattggatagaatgcatttggct
aattcttgttttgactttatagcaagtagggctgaattggatttgcttggctgggataat
attgatatttttgcccatagttag
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