Candidatus Liberibacter americanus: lam_132
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Entry
lam_132 CDS
T02902
Name
(GenBank) Inactivated superfamily I helicase
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
lar
Candidatus Liberibacter americanus
Brite
KEGG Orthology (KO) [BR:
lar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lar03400
]
lam_132
Enzymes [BR:
lar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
lam_132
DNA repair and recombination proteins [BR:
lar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
lam_132
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
AHA27506
UniProt:
U6B6L1
LinkDB
All DBs
Position
160453..163566
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AA seq
1037 aa
AA seq
DB search
MQNNNPNVFTIAPHSNFFKEVVISLLNGTLVENFQYNPYNPLSLASVTIYVPTKLAIQAL
RSEFFDIMCNKSTILPVIKPLGDILEENYIFNYDFLNSCELNQPISNIRRLLELAKLIIL
WRDRLPDAIRDIHPESPLNLPANPADAIWLAKNLAEIIDIIESEEKNWEELYSLNNEQYG
AWWIIALDFLKIASNFWTKRLYELKASSAVNYRIELMRAESEYISNRKKNDTVIIAGSTG
SMPATARLMSIVANDPNGAVVLPGLDLVMPEKIWQILTKKSNVNHSMHPQYLLAKIINFL
KIKREDVKCLGTIKDDLNLRSKIISKSFLPSGNDDIHHNDVLMQDIENAFSNVALIEANN
EREEATSIAIAMKLAMLKNKKKTALITADRNLARRVKLELTRFGIDIDISAGIPLSTTLQ
GSILITLLNAILKSNDPVAIAALIKHPMAKFGFTEKHLSRAKNALEFIALRGNKDRYNIT
KIKSVFINKISEQKYDKKSPNWRSRLSDEEKDLAALLADNIVKSTISLAKYSMNENNYSD
TLDISDWVKLTVKCLENICFDEKRKLNDLWGGANGKALASFFHNIIETGSCIKANPIEWI
DIISALISGETVKPENKKSSCLFIFGTLESRLLNFDTLILGGLNEGIWPSHIPKNPFLSR
MMQNNLGLENAEKHIGQAAHDFEMASGKRNLIYSRSLQKNNVPTIASRWLQRLLVLGGKS
FFDTLKKRGDQYINWARNLDVTTKQIITERPRPFPPLEMQPKTYSFSEVKLLISDPYAIY
AKKILKLEFIPHFENEPDKKDLGIFFHEIITQLIQNKINKNTPKIVCAMEKIIDEYFKKA
NFPPHIDIIWRNRFHKIAHSFILYEEKRHRRQEDSPAIEKIFVNIPAKMEIKSIGVKLTG
IADRIDILENGYADIIDYKTGNNPTKQMAKNLIDPQLSLEAAALKSGAFYQINCRKVAYL
SYIRLKQGLEVDRITNNEICTDELSKKSLENFVEFISSLQNGTNPFISRLRLSEKSNIHS
EYDHLARLEEWITDYDV
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaataataatccaaatgtttttactattgctccacattctaattttttcaaagaa
gttgtaatatcgcttttaaatggcactttagtggaaaactttcaatacaacccatataat
ccgctttctctagcttcagttacgatatacgtaccaacaaaactcgcaatacaagcatta
cgctcagaatttttcgatattatgtgtaataagtctacaattttaccagtgataaagcca
ttgggtgatattcttgaagaaaattacattttcaactatgattttcttaactcatgtgaa
cttaatcaacctatatctaatataaggcgactattggaattagcaaaactaattatacta
tggcgcgatcgattacctgatgcaatacgtgatattcatcctgaatcgccattaaaccta
ccagcaaatcctgcagatgcaatctggcttgcaaaaaatctagcagaaatcattgatata
attgaatcagaagaaaaaaattgggaagagctttattcacttaataatgaacaatatgga
gcatggtggattatagctttagattttctaaaaattgctagtaacttttggacaaaaaga
ctttatgagctaaaagcttcttcagctgttaattatcgaatagaactcatgagggccgaa
tcagaatatatttctaatagaaaaaaaaacgatacagtaattattgcaggatcaactgga
tctatgccggcaacagcaagattaatgtctatagtagccaatgaccctaatggggcagta
gttttaccaggattggatttagttatgccagaaaaaatatggcaaatacttactaaaaaa
tctaatgttaatcactcaatgcatccgcaatatttattagctaaaattattaattttttg
aaaattaaacgtgaagatgtgaaatgcctaggaactataaaagatgaccttaatttacgt
tctaaaataatttcaaaatccttcttgccatcaggaaatgatgatattcatcataatgat
gttttaatgcaagatattgaaaatgcattttcaaatgtagcattaatagaagcaaataat
gaaagagaagaggcaacttccatagcaatagctatgaaattagccatgcttaaaaacaaa
aaaaaaaccgcattaataaccgcggatcgtaatctagctcgtcgcgtcaaattagaacta
acacgctttggtatagatattgatatttccgctgggataccactatcaacaacattacaa
ggatctattcttataacactattaaacgctattctaaaatcaaacgatccagtagctatt
gcggctttaattaaacatcccatggcaaaatttggatttactgaaaagcatctatctagg
gccaaaaatgcacttgaattcatagctcttcgcggaaataaagatcgctataatataaca
aaaataaaatctgtttttataaataaaatatctgaacaaaaatatgataaaaaatctcca
aattggagatcacgtttatctgatgaagaaaaagatttggctgctttactggcagataat
attgttaaatctacaatatctcttgctaaatatagtatgaatgaaaataactatagcgat
actttagatatatcggattgggtcaaattaacagtaaaatgtttagaaaatatttgtttt
gatgagaaaagaaaactcaatgatttatggggaggagcaaatggaaaggctttagcttca
ttttttcataatattattgaaacaggttcttgtattaaagccaatcctattgaatggata
gacattatctccgcactcatttcaggagaaacagtcaagccagaaaataaaaaatcttct
tgtttgttcatatttggaactttggaatctagattgcttaattttgacacattaatatta
ggaggtcttaatgaaggaatttggccaagccatattcccaaaaatccatttttatctaga
atgatgcaaaacaatctaggattagaaaacgctgaaaaacatattggccaagctgcacat
gacttcgagatggcaagtggcaagcgtaatcttatatatagtcgttctttacaaaaaaat
aacgttccaacaatcgcatcacgttggttacaaagactcttggttttaggaggaaagtct
ttttttgatactctaaaaaagagaggtgatcaatatataaattgggctagaaatctagat
gtaacaacaaaacagataattacagaacgtccaagaccatttcctcccttggaaatgcaa
cctaaaacctattctttttcagaagttaaactactaataagtgatccatatgccatttat
gcaaagaaaattctaaaactagagttcattccccattttgaaaacgagccagataaaaaa
gatcttggtatattctttcatgagattatcacgcaactaatacaaaataaaatcaataaa
aacacacctaaaatcgtttgtgcaatggaaaaaattattgatgaatattttaaaaaagca
aattttcctccgcatattgatattatttggcgtaatcgttttcataaaatagctcactct
ttcatattatacgaagaaaaaaggcatagaaggcaagaggatagcccagcaattgaaaaa
atctttgttaatattcctgccaaaatggaaataaaatcaatcggagtaaaacttactggt
attgcagatcgaattgatatattggaaaatggatatgccgatataatagactataagact
ggcaataatcctacaaaacaaatggccaaaaatcttattgatccacaactatcattagag
gcggcagctttgaaatctggcgctttttaccaaatcaattgtagaaaagttgcatatctt
tcctatatacgcctcaaacaaggattggaagttgatcgtattacaaataatgaaatatgc
acagatgaactatcaaaaaaatctctagaaaattttgttgaatttatatcatcattacaa
aacggaacgaacccattcatctcacgtttgcgtctctcagaaaaatccaatattcatagt
gaatatgatcatcttgctcgtttggaagaatggataacagattatgatgtgtaa
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