Candidatus Liberibacter americanus: lam_133
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Entry
lam_133 CDS
T02902
Symbol
recB
Name
(GenBank) ATP-dependent exoDNAse
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
lar
Candidatus Liberibacter americanus
Brite
KEGG Orthology (KO) [BR:
lar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lar03400
]
lam_133 (recB)
Enzymes [BR:
lar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
lam_133 (recB)
DNA repair and recombination proteins [BR:
lar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
lam_133 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
PDDEXK_9
DEAD
AAA_30
tRNA-synt_His
Motif
Other DBs
NCBI-ProteinID:
AHA27507
UniProt:
U6B6Y5
LinkDB
All DBs
Position
163556..167068
Genome browser
AA seq
1170 aa
AA seq
DB search
MMCKDSLKVNKSIKDWLSWTRSQQLLASDPNSSAWVSANAGSGKTHILVLRVLRLFLANV
NPSTILCLTHTNAAAAEMSNRVFEIITEWSHLSDEKLFSEIQKIQNKRPSKKDIRIARQL
LLKILETPGEWKAKTIHSFCETIIQQFPLEANTTGHFSVLDEEQSKKLIEEAKKSTLASI
MSVNNIKLRQAFDEILELTNEQTLEKLISDIVSNRNNLNRFSCFANKNGGEETLLKKRFG
LPPDEKYEKIYTELSKLLDVIKKDINQYINLTKGNDSSKKTEIFKAILKEKSIEKSFDFL
SYLFITTDLSPRKNLLIKKIDINLEKKFKNHQEVFIKIRDRLNTYKMLKATLASLTLAKH
LNDNHHKLKKKYCFLDFEDLISYTNDLLKKSEVSSWIRYKLDQEINHILIDEAQDTSLIQ
WEVIRSLTDDFFVGENAHSNPRTLFAVGDEKQSIFSFQGAEHSRFFRERKINKQRITNSG
NKFSIVQLPLSFRSTADILTSVDKVFSIPENAQGLSEENDPILHRSNRIGHPGSVQIWEQ
AFSEIDNTKKDWISNFDSIPRISSKSIIAKRIANKISDMIGNDTIISNGKKRLVRADDIM
ILVRKRTSFIKLLTRFLKNEHQILVSNNDKLLLTNHLAIKDLMSLAYFMLSQEDDLSLAS
ILKSPIFNLSEDDLFEICAKRQKTETVFSSLQKLANNKTSKFRHIVEYINEIIDLSKSYS
PYDFFTLILGAKNGSKLFISRFGNEVIDILDEFLNFALRNEQKNYHTLQEFILELENYPP
TIKREQYKNHNEVRIMTVHASKGLESPIVFLVDDGSDFFINNNKLEVIPSSNDDPGTPIY
IPQANLRNSILENHIKYREKNAREEYHRLLYVGMTRASDRLIICSCKNKDKNIQGTWYDM
VYKSFKEDKRAKEIKIKTSVNNDEWSALEWRVTYDESVIIEEEQDITQFKQEDIIPKEIF
DSIPNDIDTTYILNPSILDKKDAPILSSILSVDNANQNHFIKRGLIIHNLLQVIFGLPIE
DRKQYIVSYLKKNAHLLEKKEYDNLVLSVTSLLENPIISKDISDTSYSEVSVAGKLSLNK
KDILVSGRIDLISVSNKHVIIFEYKTHNYIPKEIEDIPLSHIAQLSIYKELLKLSYTDKS
FICVLIYVSKPKTFIITQHQLDQAILKLSI
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgtaaagattcattaaaagttaataaatcgataaaagattggctttcttggaca
agatcacagcaattattagcttctgatcccaatagttctgcatgggtttccgctaatgca
ggctctgggaaaacacatatacttgttctaagagttttgcgtcttttccttgcaaacgtt
aatccttctacaatcctatgccttacccatacaaatgcagctgctgcagaaatgtcaaat
cgagttttcgaaataataactgaatggtctcacttatcagatgaaaaacttttttctgaa
attcaaaaaatacagaataaaaggccaagtaaaaaagatattagaatagcaagacaatta
ttgctgaaaatccttgaaactccaggagagtggaaagctaaaactatacattcattttgc
gaaacaattattcaacaatttccactagaagcaaatactactggtcacttttccgtatta
gatgaagaacaatcaaaaaaattaatagaagaagcaaaaaaatcaacgctcgcttccatt
atgagtgtgaataatataaaattaagacaagccttcgatgaaatacttgagttaaccaat
gaacaaactttagaaaaattaatctctgatatagttagtaataggaataatctcaataga
ttttcatgtttcgccaataaaaacggcggagaagaaactttgctcaaaaaacgatttgga
ttacctcctgacgaaaaatacgaaaaaatatacacagaattatcaaaattattagatgtt
ataaaaaaagatattaatcagtatataaatctaactaaaggaaacgatagctcaaaaaaa
acagaaatatttaaagcaatacttaaagaaaaatctatagaaaaatcatttgatttttta
tcttatttatttatcacaactgatttatctcctagaaaaaatcttttaattaaaaaaatt
gatattaatctagaaaaaaaattcaaaaatcatcaagaggtatttatcaaaataagagat
cgtttaaatacatataaaatgttgaaagcaacattagcatcattaactctagcaaaacat
ttaaatgataatcatcataaattgaaaaaaaaatactgttttcttgattttgaagatctt
atttcttacacaaatgatcttctaaaaaaaagcgaagttagttcatggataagatacaag
cttgatcaagaaattaatcatattctcattgatgaagcacaagacacaagcctaattcaa
tgggaagtaattagatctttaactgatgatttttttgttggggaaaatgcacattcaaat
ccaagaacattatttgcggtaggagatgaaaaacaatctattttttcattccaaggagca
gagcattctcgtttttttcgagaaagaaaaatcaataaacaaagaattactaattcagga
aataaattttctatagtacagcttcccttatcatttcgctcaactgctgacattctaaca
tctgtagataaagtattttctataccagaaaatgcacaaggattaagcgaagaaaacgat
cctatactgcatcgctctaatcgtatcggacatcctggcagtgtacaaatttgggaacag
gctttttcagaaattgataacactaaaaaagattggatatcaaacttcgattctataccg
agaatatcttctaaatctattattgcaaagcgtattgcaaataaaatttcagacatgata
ggtaatgatactataattagcaatggtaaaaaaagattagttcgtgcagatgatatcatg
atcttagtacgtaaacgtacttcttttatcaaattactgacacggttccttaaaaatgag
catcaaatattagtttctaataatgataaattattgcttacaaatcaccttgctataaaa
gatttaatgtctcttgcatatttcatgctatctcaagaagatgacttatctttagcatct
atacttaaaagtccaatatttaatttatcagaagatgatctatttgaaatatgtgcaaag
cgtcaaaaaacagaaacagtcttttcttccctgcaaaaacttgccaataataaaacatct
aaatttcgtcatatagttgagtatattaacgaaataattgatctttctaaatcttattca
ccctatgatttttttacactaattttaggggcaaaaaacggcagtaaactatttatttct
cgttttggaaatgaagttattgatattcttgatgagtttctaaatttcgcattaagaaat
gaacaaaaaaattatcatactctacaagaatttatattagaattagaaaattacccacct
acaataaaaagggagcaatataagaatcataatgaagtacgtataatgacggtacatgca
tcaaaaggactagaatcccctatcgtcttccttgttgatgatggatcagatttttttatc
aataacaataagttagaagttataccttcttctaacgacgatcctggaactccgatatat
attcctcaagcaaatttacgtaatagtatacttgaaaatcacataaaatatagggaaaaa
aatgcccgagaagaatatcatcgactgctatatgtcgggatgacacgcgcatcagataga
cttattatttgcagttgtaaaaataaggataaaaacatccaagggacctggtatgatatg
gtgtataaatcttttaaggaagataaaagagccaaagaaataaaaattaaaacttctgta
aataatgatgaatggagcgctcttgaatggagagttacctatgatgaaagtgtaattatt
gaagaagaacaagatataacccaatttaagcaagaagatataatcccaaaagaaattttt
gactcaattccaaatgatattgatacaacctatattttaaatccatcaattctagataaa
aaagatgcaccaattttaagttcaatattatctgtagataatgctaatcaaaatcatttt
atcaaacgtgggcttattattcataatcttttacaagtaatatttggtcttcctatagaa
gatcgtaaacaatatattgtatcatatttaaaaaaaaatgcgcatcttttggagaaaaaa
gagtacgataatttagttttatctgtgacaagtcttttagaaaatcctataatatcaaaa
gatatatctgatacttcttattcagaagtatcagttgctggaaagttatctttaaataaa
aaagatattttagtatctggacgcattgatctaatatcagtttcaaataaacatgttata
attttcgaatataaaactcataattatattccaaaagaaatcgaggatattccattatca
catattgcacaactttcaatatataaagaactactaaagttatcatatactgataaatca
tttatttgtgtgcttatttatgtctcaaaaccaaaaacattcataatcacgcaacatcaa
ttggatcaagcaattttaaagttatctatataa
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