Candidatus Liberibacter americanus: lam_145
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Entry
lam_145 CDS
T02902
Symbol
rho
Name
(GenBank) Transcription termination factor
KO
K03628
transcription termination factor Rho
Organism
lar
Candidatus Liberibacter americanus
Pathway
lar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
lam_145 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lar03021
]
lam_145 (rho)
03019 Messenger RNA biogenesis [BR:
lar03019
]
lam_145 (rho)
Transcription machinery [BR:
lar03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
lam_145 (rho)
Messenger RNA biogenesis [BR:
lar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
lam_145 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
NACHT
S1CSD-TOTE-2
AAA
AAA_25
AAA_22
Spore_III_AA
ANAPC4_WD40
Motif
Other DBs
NCBI-ProteinID:
AHA27519
UniProt:
U6B385
LinkDB
All DBs
Position
178123..179394
Genome browser
AA seq
423 aa
AA seq
DB search
MSEMKLQELKNKSPTKLLSFAESLAIENANVMRKQELMFSILKVLSSRDIEIIGEGVIEV
LQDGFGFLRSPDANYLAGPDDIYISPSQIRSFSLKTGDTVEGPIRAPKEGERYFALLKVN
SINFNSPEKVRNKIHFDNLTPLYPDRRFNMELNDPDNKDISSRVIDLIAPIGKGQRSLIV
APPRTGKTMLLQNIAHSIKNNHPECYLIVLLIDERPEEVTDMQRSVQGEVISSTFDESAA
RHVQVAEMVISKAKCLVESGLDVVILLDSITRLCRAYNAVIPSSGKVLTGGVDANALQRP
KRFFGAARNIKEGGSLTIIGTALVDTGSRMDEVIFEEFKGTGNSEVVLDRKIADKRIFPA
MDIIKSGTRKEDLLVERQDLQKIFMLRRIVSSMNTSDAIEFLIDKLKQTKDNKDFFYSMN
KQN
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaatgaagcttcaagagcttaaaaacaagtctccaacaaaacttctttcattt
gctgagtctcttgcaatagaaaatgcaaacgttatgcgaaaacaagagcttatgttttct
atattgaaggttttatcttctagagatatagaaatcataggagaaggtgttattgaagtt
cttcaagatggatttggttttttacgttctcctgatgctaattatttagctggtcctgat
gatatttatatatctccatctcagattaggagtttttctttaaaaacaggtgatacagtt
gaaggaccaattagggctccaaaagaaggtgaaagatattttgctcttttaaaagtaaat
tctatcaattttaattctccagaaaaagtacgcaacaaaatacattttgataatttaact
ccactttatccagatagaagatttaatatggaattaaatgatccagataataaagatata
tcttctcgtgttattgatttaatagctccaattggtaaaggacaaagaagtttaatagtt
gctcctccgcgtactggtaagactatgcttcttcaaaatatagctcattctataaaaaac
aatcatccagaatgttatttgatagtattactgattgatgagaggccagaagaagtaact
gatatgcagagatctgttcaaggagaagtaatatcatctacatttgatgaatctgctgct
cgtcatgtgcaagttgctgaaatggttatttcaaaagctaagtgtttagttgaatctggt
cttgatgtagtaatacttttagactcaattactcgtttatgtcgagcttataatgctgtt
ataccttcgtctggtaaggttttaactggtggtgtggatgcaaatgctcttcaacgtccg
aaaagattttttggtgcagcgagaaatataaaagaaggtggttctcttacaattattggt
acagcgttagttgatactggaagtcgtatggatgaagttatttttgaagaatttaagggt
actggaaattctgaagttgttttagataggaaaatagcagataaaagaattttccctgcc
atggatattattaagtctggtactcgtaaggaagatttgctagttgaacggcaagatctt
caaaagatttttatgttacgtcgtattgtttcttctatgaatacttctgatgccatagaa
ttcttgatagataagttgaaacaaacaaaagataataaagatttcttttattctatgaat
aaacagaattaa
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