Candidatus Liberibacter americanus: lam_164
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Entry
lam_164 CDS
T02902
Symbol
dcm
Name
(GenBank) Site-specific DNA methylase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
lar
Candidatus Liberibacter americanus
Pathway
lar00270
Cysteine and methionine metabolism
lar01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lar00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
lam_164 (dcm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lar03000
]
lam_164 (dcm)
03032 DNA replication proteins [BR:
lar03032
]
lam_164 (dcm)
03036 Chromosome and associated proteins [BR:
lar03036
]
lam_164 (dcm)
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
lar02048
]
lam_164 (dcm)
Enzymes [BR:
lar01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
lam_164 (dcm)
Transcription factors [BR:
lar03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
lam_164 (dcm)
DNA replication proteins [BR:
lar03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
lam_164 (dcm)
Chromosome and associated proteins [BR:
lar03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
lam_164 (dcm)
Prokaryotic defense system [BR:
lar02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
lam_164 (dcm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
TRM5-TYW2_MTfase
Motif
Other DBs
NCBI-ProteinID:
AHA27538
UniProt:
U6B4I1
LinkDB
All DBs
Position
complement(198904..199851)
Genome browser
AA seq
315 aa
AA seq
DB search
MYKFIDLFCGIGGFRLALEKRGLECVFSSDIDPHVQEVYKQNFGEKASGDITEIPAKKIP
KHDILCAGFPCQSFSISGKHEGISDPRGRLFYEIQRIAQYHQPYVMILENVKNILTIDGG
NVIKTIEQKLDEIGYMLNKHVLNASYFGIPQARERVYFVALRKDMKDSKKPNLDYSRPKE
SNKKVFLESILEKEVDSDFIVVRGDIKITKNENDVLNQLKPIRVGTLNKGGQGERIYSPK
GHAITQSAYGGGVGARTGLYNTEQGIRRLTIDECKKAMGFPTRHKVSNGLQGYKQLGNAV
VPDMIGHVYDSIRII
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgtataaatttatagatttattttgtggtatcggagggtttaggcttgctttggaaaaa
agaggactagagtgtgttttttcaagcgatatagatcctcatgttcaagaggtatataaa
caaaattttggtgaaaaagccagtggagatattacagagataccagcaaaaaaaataccg
aaacatgatattttgtgtgctggatttccttgccaatccttttcaatttcagggaagcac
gaaggaatatctgaccctagaggaaggttgttttatgaaatacaaaggattgcacaatac
catcaaccttatgtcatgattcttgaaaatgtcaaaaatatattaactattgacggtgga
aatgtaattaaaacaatcgaacaaaaattagatgaaattggttatatgttaaacaagcat
gttttaaatgcgtcttattttggtatccctcaagcaagagaaagagtttattttgtagct
ttgagaaaagatatgaaagatagcaaaaaacctaatttggattatagtcgacctaaagaa
agtaataagaaggtatttctagaaagtatattagaaaaagaagtggatagtgattttatt
gtagttagaggtgatataaaaatcacaaaaaatgaaaatgatgttttaaatcaattaaag
ccaattagagtaggaactcttaataaaggtgggcaaggagaacgtatttatagccctaaa
ggtcatgctataactcaatcggcatacggtggcggagtgggtgctagaacaggactatac
aacacagagcaaggaattaggcgacttacaatagatgaatgcaaaaaagcaatggggttt
ccaacaagacataaagtcagtaatggattgcaaggttataagcaactagggaatgctgtt
gttcctgatatgatcggtcatgtttatgacagtataaggattatataa
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