Candidatus Liberibacter americanus: lam_176
Help
Entry
lam_176 CDS
T02902
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
lar
Candidatus Liberibacter americanus
Pathway
lar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
lam_176 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lar03019
]
lam_176 (pnp)
03016 Transfer RNA biogenesis [BR:
lar03016
]
lam_176 (pnp)
Enzymes [BR:
lar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
lam_176 (pnp)
Messenger RNA biogenesis [BR:
lar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
lam_176 (pnp)
Transfer RNA biogenesis [BR:
lar03016
]
Prokaryotic type
tRNA degradation factors
lam_176 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
KH_N4BP1_2nd
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
AHA27550
UniProt:
U6B3N1
LinkDB
All DBs
Position
212440..214542
Genome browser
AA seq
700 aa
AA seq
DB search
MFDVHTVEIDWAGRPLKLESGKIARQADGAVLATYGETVVLASVVCSRSIKESQDFFPLT
VNYQERTYAVGKIPGGYLKRESRPTENEILISRLIDRSIRPLFHKDYKNETQVIVNVMQY
DLENDPQIVGMIAVSAALMLAGLPFKGPVVGAQVDYVNNKYVLNPRFDEDEKGSLDLFVS
GTRDAVLMVELEADQLSEDLVIDAIMFGHSESQSVIDAISRLVKLCGKDPLSVEYKDLSE
LKEKAMGLIESDLRKACYVVDKSNRRDLIDEINNKVISQFEEEDPDCDKEDIRSILDDIK
YDIVRKDILANKCRMDGRDLTTVREISAEVGILQRTHGSALFSRGATQAIVVTTLGTKED
EQFIDSLSGTKKNDFMMHYNFFPFSVGEVGRISSLSRREIGHGMLAKRAIRPVLPKTEIF
PYTLRMVSEITESNGSSSMATVCGSSLSLMDAGVPILKPVAGIAMGLIKEDDRFVILSDI
SGDEDHLGDMDFKIAGTDSGITAMQMDMKIEGISKDIMVIALQQAKEGRLHILAEMSKVM
SESRLKLGEFAPRIEVMMIAVDKIRDVIGTGGKVIRDIVDKTGAKISIEDDGTIKIASTS
TEGIEAARKRIRQIVDVPEVNKIYKGKVVKTTDFGAFVNFFGARDGLVHISQLSSERVAK
TSDVVKQGDTVWVKLLDFDDRGKIKLSMKAVDQKTGKLIS
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatgtgcatacagttgagattgattgggctgggcgtcctcttaaattagagagc
ggtaagattgctcgacaggctgatggtgctgtattggcgacttatggagaaacagttgtt
ttggcatctgtggtttgtagccgatcgatcaaggaatctcaagatttctttcctttgact
gttaattatcaagagagaacatatgctgttggcaaaattccaggaggttatttaaaacga
gaatcccgccctactgagaatgaaatattgatttctcgtctaatcgatcgttcaatcagg
cctttgtttcataaagattataaaaatgaaacgcaggtaattgttaatgttatgcaatat
gatttagaaaatgatcctcaaattgtaggtatgatagctgtttctgcagcattgatgttg
gccggattgccatttaaaggtcctgtagttggggcgcaagtagattatgtgaacaataaa
tatgttttgaaccctcgttttgatgaagatgaaaaaggatctcttgatctttttgtctca
ggaactagagatgctgttcttatggttgaattagaggctgaccagttgtctgaggatttg
gtaattgatgctattatgtttggtcattctgaatctcaatctgtcattgatgctatttcc
aggcttgttaaactatgtggaaaagatcctttatctgttgaatataaagatttatcggaa
ttaaaagagaaggctatgggtttaattgaatcggatttgcgaaaagcttgttatgttgtc
gataaatctaatcgtcgtgatttaattgacgagattaataacaaagttatttctcaattt
gaggaagaagatcctgattgtgataaagaggatattcgttctattttagatgatataaaa
tatgatatagttagaaaagatattcttgcaaataaatgtcgtatggatggtagagatctt
acaacggttcgtgaaattagtgcggaagttggcattttacaacgtacccatggttctgcg
ttgttttctaggggggctactcaagctatagtagtaaccactcttggaacaaaggaagat
gagcaatttatagactctttgtctggcactaagaaaaatgattttatgatgcattataac
ttcttccctttttctgtgggagaggtagggcgtattagctctcttagcagaagagaaatt
ggtcatggtatgctggctaaacgtgctattcgccctgttctgccaaaaacagaaattttc
ccttatacactgcgcatggtttctgaaataactgaatctaatggttcttcttcaatggca
acggtatgtggttcttctttgtccttgatggatgcaggagttcctatattgaagccagtt
gcgggaatagctatggggcttataaaagaagatgatcgatttgtcattttatctgacata
tctggagatgaagatcatcttggagatatggattttaaaattgcaggaacagattctggt
attactgctatgcaaatggatatgaagattgaaggaatttctaaagatattatggttatt
gccttgcagcaggcaaaagagggacgtcttcatatcctagctgaaatgtctaaagttatg
tctgaaagccgtttaaaattaggtgaatttgctcctcgtatcgaagttatgatgatcgct
gttgataagattagggatgttattggaactggtggcaaagtgattcgtgacatagttgat
aaaacaggggcaaagattagtatagaggatgatggtactattaagatagcctctacttct
acggaaggcatagaagctgctcgtaaaagaattcgtcagattgttgatgttccagaagtt
aacaagatttataaaggaaaagttgtgaaaacaacagattttggcgcttttgtgaacttt
tttggtgcgcgagatggactggtgcatatatcgcaattatcttcagagagggtggcaaaa
acaagtgatgtagttaaacagggtgatacagtatgggttaaattattggattttgatgat
cgcggtaagattaaattatctatgaaggctgtggatcaaaagacaggaaaattaatatcc
taa
DBGET
integrated database retrieval system
