Candidatus Liberibacter americanus: lam_211
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Entry
lam_211 CDS
T02902
Symbol
himA
Name
(GenBank) Bacterial nucleoid DNA-binding protein
KO
K05788
integration host factor subunit beta
Organism
lar
Candidatus Liberibacter americanus
Brite
KEGG Orthology (KO) [BR:
lar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lar03032
]
lam_211 (himA)
03036 Chromosome and associated proteins [BR:
lar03036
]
lam_211 (himA)
03400 DNA repair and recombination proteins [BR:
lar03400
]
lam_211 (himA)
DNA replication proteins [BR:
lar03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
lam_211 (himA)
Chromosome and associated proteins [BR:
lar03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
lam_211 (himA)
DNA repair and recombination proteins [BR:
lar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
lam_211 (himA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-DNA_bdg
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
AHA27584
UniProt:
U6B3F0
LinkDB
All DBs
Position
complement(255220..255513)
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AA seq
97 aa
AA seq
DB search
MIKSSLVEAIAKKNPNINSKNIEQMLNILLEEITNALIYGRRVELRGFGTFAVKKRIARL
RRSPYNKKVMPIQEKWIPFFRSGKNLKERLNENYNPK
NT seq
294 nt
NT seq
+upstream
nt +downstream
nt
atgataaaatcttctttagtagaagcaatcgcaaaaaaaaatccgaatattaatagcaaa
aatattgagcaaatgctcaatattttattagaagaaattactaatgctcttatatatggc
agacgcgttgagctacgaggatttggaacttttgccgtaaaaaaacgtattgcaagatta
agaagatctccttataataagaaggttatgcctattcaagaaaaatggatcccgtttttc
agatcaggcaaaaatttaaaagaacgtcttaatgagaattacaatcctaaataa
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