KEGG   Candidatus Liberibacter americanus: lam_330
Entry
lam_330           CDS       T02902                                 
Symbol
ribD
Name
(GenBank) Pyrimidine deaminase
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
lar  Candidatus Liberibacter americanus
Pathway
lar00740  Riboflavin metabolism
lar01100  Metabolic pathways
lar01110  Biosynthesis of secondary metabolites
lar01240  Biosynthesis of cofactors
lar02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:lar00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    lam_330 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    lam_330 (ribD)
Enzymes [BR:lar01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     lam_330 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     lam_330 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam NmrA
Other DBs
NCBI-ProteinID: AHA27700
UniProt: U6B478
LinkDB
Position
382882..383958
AA seq 358 aa
MPISSFDERFMLAALRLSRWGIGLTSTNPSVACLIVNNGIIVGRGVTACGGRPHAETKAI
EEAGDRSMGATAYVTLEPCAHYGKSPPCAKSIIKSGIIRVVFCVSDPDIRVSGRGLSLLL
QHGIIVDKILEKEGEKSLVTYLTRQVKKRSHVTLKLALSQDNMMGVIGQGNVAITGSVSI
AQSHLLRAQSDAILVGIGTVLSDNPELTCRLNGLNDRSPTRIILDPHLKLSMDSKIVCTS
YFAPVIVVADTDTSPAANSLKKRNVTIIRCNCYDIEQLLSILAVLNITSLLVEGGMAVAY
SFIKSKLVDSIIIYQSNIIIGNKGLPSPIEFSEIEDSYFCNRLNYFGNDVCFEYLRKD
NT seq 1077 nt   +upstreamnt  +downstreamnt
atgcctatatcttcttttgatgaaagatttatgttagctgcattgcgactttctcgttgg
ggaattggtttaacatctactaatccttctgtcgcttgtttgattgttaataatggtatt
attgttggtagaggtgtcaccgcttgtggaggacgccctcatgctgagactaaggcaatt
gaagaagcgggcgatagatctatgggtgctactgcttatgttactctagagccttgtgca
cattatggtaaatcccctccttgtgcaaaatctattattaaatctggaattatacgtgtt
gttttttgtgtcagtgatcctgatattcgagtttctggacgtggattgtctcttttatta
caacacggaataattgttgataagattttagaaaaggaaggtgaaaaatctcttgtaacg
tatctaactcgtcaagttaagaagcgttcacatgtaactcttaagcttgctttatcacaa
gataatatgatgggagttattggacagggcaatgttgctattacaggttctgtttcaata
gctcagtcgcatttgctgagagcgcagtcagatgctattcttgttggtataggaactgta
ttatctgataatccggagttaacctgtaggttaaatggactaaatgatcgttctcctact
cgtattattcttgatccacatcttaaattatcaatggattctaagattgtttgtacatct
tattttgcgcctgtaattgttgtagcggatacagatacttctcctgctgctaactcttta
aaaaaaaggaatgtaactattattcgttgtaattgttatgatatagaacaattattatct
atattagctgttctaaatatcacttctttgttagtggaaggagggatggcagttgcctac
tcttttataaaatctaaacttgttgattctattattatttatcaatcaaatataattata
ggcaataaagggcttccttctcctattgaatttagtgaaattgaagatagttatttttgt
aatcgtcttaactattttggtaatgatgtttgttttgaatatttaaggaaagattaa

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