Candidatus Liberibacter americanus: lam_560
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Entry
lam_560 CDS
T02902
Symbol
groL
Name
(GenBank) Chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
lar
Candidatus Liberibacter americanus
Pathway
lar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
lam_560 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lar03019
]
lam_560 (groL)
03110 Chaperones and folding catalysts [BR:
lar03110
]
lam_560 (groL)
03029 Mitochondrial biogenesis [BR:
lar03029
]
lam_560 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lar04147
]
lam_560 (groL)
Enzymes [BR:
lar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
lam_560 (groL)
Messenger RNA biogenesis [BR:
lar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
lam_560 (groL)
Chaperones and folding catalysts [BR:
lar03110
]
Heat shock proteins
HSP60 / Chaperonin
lam_560 (groL)
Mitochondrial biogenesis [BR:
lar03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
lam_560 (groL)
Exosome [BR:
lar04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
lam_560 (groL)
Exosomal proteins of other body fluids (saliva and urine)
lam_560 (groL)
Exosomal proteins of breast cancer cells
lam_560 (groL)
Exosomal proteins of colorectal cancer cells
lam_560 (groL)
Exosomal proteins of bladder cancer cells
lam_560 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
AcnX_swivel_put
AAA_PrkA
DGCcoil
Motif
Other DBs
NCBI-ProteinID:
AHA27909
UniProt:
U6B4B5
LinkDB
All DBs
Position
639806..641452
Genome browser
AA seq
548 aa
AA seq
DB search
MSAKDVKLGASARDGIACGVNMLADAVKCTLGPKGRFVVIGGSYGSCRATKDGVTVAKSI
NFKDPLHEIGAQMLRNVASNAEDHSGDGTTTATCIAQAIIHEGRKAVIAGRNPMDLKRGI
DDAVKEVVSYLQSNSKKVASREEIVQVATISANGDKDIGEKIAYAIEKIGPSGVVTIDQA
KTAETKVKIVEGMQFDRGYISPYFITNRSKPIAEQDNPYILVCDKKISTLASLLPILELA
VKNSRPLCIIAEDVESEALATIVVNKMRASLQVLAIKAPAFGDRRKQIMQDIATLVGATL
ISEEVGLGLEQVTEDHLGSAKRVVSTKDDTTIVGGNGNQDELNARIKEIEAAIEDTTSDY
DRDKLKERLAKLSSGVAVIEVGDVTETALTEKKDRYQDSLSATRAAIEEGIIAGGGIGLL
RASKELSVKGDNNDQSAGVEIIRNAIKAPCRQIIQNAGDEAALITSKIQENNSVNFGYDA
QNGVFGDMFSMGIVDPVKVVRNALQDAASVASTLLMTEATVTDIPKDENSVPQMPGGGMP
GMGGMDMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgtccgctaaagacgttaagttaggagctagtgctcgagatggtatagcatgtggcgtt
aatatgctcgcagatgctgtgaagtgtacacttggcccaaaaggtcggtttgttgttata
ggcggttcttacggcagctgtagggctacaaaggacggtgtgactgttgccaagagtatt
aattttaaagatccgttacacgagattggcgctcaaatgttgcgcaatgttgcttctaat
gcagaagatcattcgggcgatggtacaacaacagctacttgtattgctcaagcaattatt
catgagggcaggaaagctgttatagctggtagaaatcctatggatttaaaacgcggtata
gatgacgctgttaaagaagtagttagttatctgcaatcaaacagtaaaaaagttgcaagt
cgtgaagaaatagtgcaggttgctactatttctgctaatggagataaagatataggtgaa
aaaattgcctatgcaatagaaaaaatagggcctagtggcgttgttacaattgatcaggct
aagaccgctgaaactaaagttaaaatagttgaaggtatgcagttcgatagaggatatata
tctccatattttataactaatagaagcaagccaattgctgaacaagataatccatatatt
ttagtttgcgataaaaaaatatctactttagcttcattgctccctatattagagcttgca
gttaagaatagtcgtcctttgtgcattatcgctgaagatgtggaaagtgaggcattggca
actattgtggtcaacaagatgagggcttctttgcaagttttagctattaaggctcctgct
tttggtgatcgtcgtaagcaaattatgcaagatattgcaacattggtaggcgctactttg
atttccgaagaggttggtcttggtcttgagcaagttacagaggatcatttaggttcagct
aagagagtagtatctactaaagatgatactacaatagttggcggtaacggtaatcaggat
gagttaaatgctcgtatcaaggaaattgaagctgctattgaagatactacttccgactat
gatcgtgataagcttaaggagcgtcttgctaagttatctagtggcgtagccgttatagaa
gttggagatgtaacagagacggcattgactgagaaaaaggatagatatcaagattctctt
tctgctacacgtgcggctattgaagaaggaattatcgcgggtggtggaataggcctcctt
cgcgcttctaaggagttgtctgttaaaggtgacaataatgatcagtctgctggtgtagaa
attatccgtaatgctattaaagctccttgtcgtcagattattcaaaatgcaggtgatgaa
gctgctctgattacatctaagatacaagaaaataatagtgttaatttcggatatgatgct
cagaatggtgtttttggcgacatgttttctatgggaatagtagatcctgttaaagttgtc
agaaatgctcttcaggatgctgcttccgttgcttctacattgctaatgactgaagctact
gtgacagatattccaaaagatgagaattcagttcctcaaatgcctggtggtggtatgcct
ggtatgggtggtatggatatgatgtaa
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