Candidatus Liberibacter americanus: lam_850
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Entry
lam_850 CDS
T02902
Symbol
uvrD
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lar
Candidatus Liberibacter americanus
Pathway
lar03420
Nucleotide excision repair
lar03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
lam_850 (uvrD)
03430 Mismatch repair
lam_850 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lar03400
]
lam_850 (uvrD)
Enzymes [BR:
lar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
lam_850 (uvrD)
DNA repair and recombination proteins [BR:
lar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
lam_850 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
lam_850 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
DEAD
AAA_11
Viral_helicase1
PcrA_UvrD_tudor
PhoH
DUF6364
Motif
Other DBs
NCBI-ProteinID:
AHA28189
UniProt:
U6B568
LinkDB
All DBs
Position
972040..974259
Genome browser
AA seq
739 aa
AA seq
DB search
MNNSNNKEDYVKNYSLNNSSDYINRLNTQQKHAVTCIDDNPLLILAGSGTGKTTVLIARM
LYLIDQKKISSSKILAITFTNQAAQNIKDRFISLGYNIPKIKTFHSFCSDLLRKKADLIN
MQPNFTIINGNMSQKIIKEIMKDQGIEPKEHLKYSTERITYWQNNGLSPKEIDRYYKSKN
DEIAIDIYHRYTENLQKHNSIDFGGLIIKSIEVLRNPHILKEYHQYISHVMVDEYQDVNP
SQYMLLRLLYQKEDEKQRIKLCCVGDEDQCIYEWRGSRVDHITHFEKDFKGANIIKLEQN
YRSNYHILNTANKLISHNKNRIGKTLFTERNFPSDQKVKIHVFQESISETSTITKEIQEF
METGIPLNEIAILVRTSLQIKSFEDEFITQKIPYEVIKGRGFYDLREIRNAISYLRLTFN
KNNYHDFMEIINTPKRGIGKESLKKIKEYADQHEISMFKATEAIIKTDKLQNKQIKTLIN
FINDIYRWEKGLKKHSKYNNIAEIILEESGYIEMHRNDVSSIGSEERINNLYELISTVGE
YKLIDQFIEDVSLRENNNRLYQSLDCVKIMTLHAAKGLEFDTVFISGWEQGLFPHQNSID
SEDYEKELEEERRLAYVGITRAKNNCHLCYVINPRNHFYNNNFGHKNEPSQFLLEMYNPD
HVQDIMYDDIFCSFNEYWENSFLESNILYKYYSKFNPGDLVRHEKFGTGKIIHVLDNKSD
IEFDNNHRKLIYNNFIKKL
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
gtgaataatagcaataataaagaagattatgtgaaaaactatagcctaaataatagtagt
gattatattaatcgattaaatacacaacaaaagcatgctgtcacctgtattgacgataat
ccactattaatattagctggatcaggaactggcaaaactacagttttaattgcacgcatg
ctctatttgatagaccaaaaaaaaatatcttcatcaaaaatacttgctattacttttact
aatcaagcagcacaaaatataaaagatagatttattagcttgggatataatatacctaaa
ataaaaacttttcattcattttgttcagacttgttacgtaaaaaagcagatcttataaat
atgcagcctaattttactattattaacggcaatatgtctcaaaaaattataaaagagatc
atgaaagatcagggaatagagccgaaagagcatcttaaatattccactgaaagaataact
tattggcaaaataatggattaagtccaaaagaaattgacagatattacaaaagtaaaaat
gatgaaatagctattgatatttatcatcgttatacagaaaatctacaaaaacacaatagt
atagattttggaggattaattataaaaagcatagaagtgctacgtaatccgcatatttta
aaggaatatcatcaatatatttcacatgtcatggtagatgaatatcaagatgtaaatcct
tcacaatatatgttattacgattattgtaccaaaaagaagacgaaaaacaaagaattaaa
ttatgctgtgttggcgatgaagaccaatgtatttatgaatggcgtggctcaagagttgat
catatcacacattttgaaaaagattttaaaggggctaatataataaaacttgagcaaaat
tatcgatcaaattatcatattctaaataccgcgaataaattgatttctcacaataaaaat
cgcattggaaaaacactatttacagaaagaaattttccaagcgatcaaaaagtcaaaata
catgtgttccaagaaagtatttcagaaacatctactataactaaagaaattcaagaattc
atggaaacaggaattcctttaaatgagatagcaattttagttcgtacatcattacaaata
aaaagtttcgaagatgaatttataacacaaaaaattccatatgaagtaataaaaggaaga
ggcttttatgaccttcgagaaataagaaatgccatctcttatttacgattaacatttaat
aagaataactatcatgattttatggaaataattaacactcctaaaagaggaataggaaaa
gagagcttaaaaaaaattaaagaatatgctgatcaacatgaaatatcaatgttcaaggct
acagaagcaataattaaaaccgataaattacaaaacaaacaaatcaaaacactaataaat
tttataaacgatatttaccgttgggaaaaaggattaaaaaaacactcaaaatataataat
attgccgaaataattcttgaagaaagtggatatattgagatgcatagaaatgatgtatct
tcaataggatcagaagaaaggattaataacttatacgaattaatttccactgtaggagaa
tataaattaatagatcaatttattgaagatgtatctttgagagaaaataataatcgatta
tatcaatccctcgattgtgtaaaaataatgactctacatgctgcaaaaggtctagaattt
gacacagtatttatctcaggatgggaacaaggccttttccctcatcaaaattccattgat
tcagaagattatgaaaaggaattggaagaagagagaagactagcatatgtagggattact
cgggcaaaaaataattgtcatctttgttatgtaatcaatccaagaaatcacttttataat
aataattttggtcataagaacgaaccatctcaatttttgttagaaatgtataatcccgat
catgttcaagacataatgtatgacgatattttctgtagtttcaatgaatattgggagaat
tcgtttctagaaagtaatattttatataaatattatagtaaatttaatcccggcgatctg
gtaagacatgaaaaatttggaactggcaaaattatccatgttttagataataaatcagac
attgaatttgataataatcatcgaaagttaatatataacaactttataaaaaaattataa
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