Candidatus Liberibacter americanus: lam_919
Help
Entry
lam_919 CDS
T02902
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase alpha subunit/40 kD subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lar
Candidatus Liberibacter americanus
Pathway
lar03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lar00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
lam_919 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lar03021
]
lam_919 (rpoA)
03400 DNA repair and recombination proteins [BR:
lar03400
]
lam_919 (rpoA)
Enzymes [BR:
lar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
lam_919 (rpoA)
Transcription machinery [BR:
lar03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
lam_919 (rpoA)
DNA repair and recombination proteins [BR:
lar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
lam_919 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF211
Motif
Other DBs
NCBI-ProteinID:
AHA28251
UniProt:
U6B8S6
LinkDB
All DBs
Position
complement(1059081..1060103)
Genome browser
AA seq
340 aa
AA seq
DB search
MIQKNWQELIKPSNIEFKVLENEEENRTMLVAEPLPRGFGNTLGNALRRVLLSSLRGAAI
TAVQIDGVLHEISSIKGVREDLTNIILNIKGINLKMSGDASRKVTVFKRGPGVVTAGDIQ
TVNDIEILNPNHVICNLDIDAVVRIELTVSKGHGYVPAQYNKSENDPIGLIPIDGLYSPI
KKASYKVESAREGQVLDYDKLSMVIDTDGSISGEDAVAFAARILQDQLSVFINFAEPKKE
EKEDMDVDRLPFNPAMLRKVDELELSVRSANCLRGDNIVYIGDLIQKTEAEMLRTANFGR
KSLFEIKSVLATMGLFLGMHLPDWPPENVEELAKQYEDKC
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgatccagaagaactggcaagaattaattaaaccgagcaacattgaatttaaagtgctt
gaaaatgaagaagaaaataggacgatgctggttgcagagcctcttcctcgtggtttcgga
aatactttagggaatgctcttcgtcgtgtgttgctttcttctttgagaggtgcggctata
actgctgttcagattgatggtgttttgcatgagatttcctctataaagggagttcgagaa
gatctgacaaatataatccttaatattaaagggattaatttaaagatgtcgggtgatgct
tctagaaaagttactgtatttaagcgtggtcctggtgtggttactgctggagatatacaa
actgtcaatgacatcgagatacttaatccaaatcatgttatctgtaatcttgatatagat
gcggttgttcgtatagagcttacggtttctaaaggtcatggttatgtgcctgctcagtat
aataaatctgaaaatgatcctattggtttaattcctatagatggattgtattctccaatt
aagaaagcttcttataaagtagaaagcgctcgtgaagggcaggttcttgattatgataaa
ttaagtatggttattgatactgatggctctataagtggagaagatgctgttgcatttgct
gctcgtattcttcaggatcagttaagtgtatttataaattttgcagaacctaaaaaagaa
gaaaaagaagatatggacgttgatcgtcttcctttcaaccctgctatgctgagaaaagta
gatgaattagagctttcagttcgttctgcaaattgtttgagaggagataacatagtttat
atcggcgatttgattcaaaaaaccgaggctgaaatgcttcgtacggctaactttggtagg
aagtctctatttgaaatcaagagtgttttggcaacaatggggctatttcttggcatgcat
ttgccagattggcctccagaaaatgtagaagagttggctaaacagtatgaagataagtgt
taa
DBGET
integrated database retrieval system
