KEGG   Lysobacter arenosi: HIV01_000540
Entry
HIV01_000540      CDS       T07237                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
lare  Lysobacter arenosi
Pathway
lare00521  Streptomycin biosynthesis
lare00523  Polyketide sugar unit biosynthesis
lare00525  Acarbose and validamycin biosynthesis
lare00541  Biosynthesis of various nucleotide sugars
lare01100  Metabolic pathways
lare01110  Biosynthesis of secondary metabolites
lare01250  Biosynthesis of nucleotide sugars
Module
lare_M00793  dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:lare00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    HIV01_000540 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    HIV01_000540 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    HIV01_000540 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    HIV01_000540 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    HIV01_000540 (rfbB)
Enzymes [BR:lare01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     HIV01_000540 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase RmlD_sub_bind 3Beta_HSD Polysacc_synt_2 NAD_binding_4 adh_short NAD_binding_10
Other DBs
NCBI-ProteinID: QSX75100
LinkDB
Position
105693..106745
AA seq 350 aa
MPTWLVTGGAGFIGGNFVLEAVRQGIRVVNLDVLTYAGNLDTLKSIQGDANHVFVQGDIG
DAGLVESLLSEHRPDAVINFAAESHVDRSIDGPAAFVQTNVVGTLALLEKVRDYWKTLSG
AASDTFRFLHVSTDEVYGTLGETGKFTEQTPFAPNSPYSASKAASDHLVRAFHHTYGLPV
LTTNCSNNYGPYQFPEKLIPLVIAKALAGESLPVYGDGRNVRDWLFVTDHCAAIRRVLEA
GRIGETYNVGGDAERENIVVVKTICKLLDERNPLADGRSRETLIKFVPDRPGHDRRYAID
ASKLHSELGWYPTVTFEQGMAQTVEWYLQNQPWVSRVLDGSYRLERIGQA
NT seq 1053 nt   +upstreamnt  +downstreamnt
gtgcccacctggcttgtaaccggcggcgccggttttattggcggaaatttcgttcttgag
gcagtgaggcagggcatccgggtcgtaaacctggatgttctgacgtatgccggcaacctg
gataccctcaagtccatccagggcgatgccaatcacgtcttcgtgcagggcgacatcggc
gacgcagggctggtcgaaagcctgctgagcgagcatcgtcccgatgccgtcatcaacttt
gccgccgaaagccacgttgatcgttccatcgacggccccgcggcattcgtgcagaccaat
gtcgtgggcacgcttgcgttgctcgagaaggtgcgcgactactggaagacactgagcggc
gcggccagcgatacgttccgcttcctgcacgtctcgaccgacgaggtctatggaacgctg
ggcgagaccggcaagttcaccgagcagacaccgtttgcgcccaactcgccctactcggcg
tcgaaggccgcgtcagaccacctggtgcgcgccttccaccacacttacggcctgccggtc
ctgacgaccaactgctcgaacaactacggtccttaccagttccccgagaagcttattccg
ctggtgatcgccaaggcgctcgccggcgagtcgctgccggtctacggcgacggacgcaac
gtgcgcgactggctgttcgtcacggatcactgcgcggcgatccgccgcgtgctggaagcc
ggtcgcattggcgaaacctacaacgtcggcggtgatgccgagcgcgagaacatcgtcgtc
gtcaagacgatctgcaagctgctcgacgagcgcaacccgctggccgatggccgcagccgc
gagacgctgatcaagttcgtgccggatcgcccgggccatgatcgccgctatgcgatcgac
gcgtccaagctgcattccgaactgggctggtatccgacggtgacgttcgaacagggcatg
gcgcaaacagtcgagtggtacctgcagaaccagccatgggtcagtcgcgtgctggacggc
agctatcgcctcgaacgaatcggccaggcctga

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