Lysobacter arenosi: HIV01_003105
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Entry
HIV01_003105 CDS
T07237
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
lare
Lysobacter arenosi
Brite
KEGG Orthology (KO) [BR:
lare00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lare03016
]
HIV01_003105 (truA)
Enzymes [BR:
lare01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
HIV01_003105 (truA)
Transfer RNA biogenesis [BR:
lare03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HIV01_003105 (truA)
Prokaryotic type
HIV01_003105 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
QSX75541
LinkDB
All DBs
Position
642052..642897
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AA seq
281 aa
AA seq
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MVDTATAADAPPSRRHALGVEYDGSGFSGWQRLSKHGEPEREGEQTLQAALEQALTFVAG
HPVEVVCAGRTDAGVHAACQVVHFDSTAVRDPRGWMLGVTSRLPPQLCVRWCQPVPDDFH
ARFSARARRYRYRILNRPVRPALGRQYLSWERRPLDADAMDRAAQALLGENDFSAFRTVH
CQAPHAMREMQAIRVRRDGEIVEVEVQANAFLHHMVRNIVGSLLMVGSGEQPEAWIAQLL
AGRDRTVAGPTAPSAGLVFLGPRYPAQWDLPAEVTLSGSAL
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
gtggtcgataccgcaaccgccgccgacgcccccccgtcgcggcgccatgccctcggcgtc
gaatacgacggcagcgggttctcgggctggcaacggctgagcaagcatggcgaaccggag
cgggagggcgagcagaccctgcaggccgcgctcgagcaggcgctgaccttcgtcgccggg
catccggtcgaggtggtctgtgccggtcgcaccgacgccggcgtgcacgccgcttgccag
gtcgtccacttcgacagcaccgccgtgcgtgatccgcgcggctggatgctcggcgtcacc
agccgcctgccgccacagttgtgcgtgcgctggtgccagccggtgccggacgacttccat
gcccgcttctcggcacgcgcgcgccggtatcgctaccgcatcctcaatcgcccggtgcgt
ccggccctgggccgccagtacctgagctgggagcggcgcccgctcgatgccgacgccatg
gatcgcgccgcgcaggcgctgctcggcgagaacgacttttccgcattccgcaccgtgcat
tgccaggcgccacacgcgatgcgcgagatgcaggcgatccgcgtgcgtcgcgatggcgaa
atcgtcgaggtcgaagtgcaggccaatgcgttcctgcatcacatggtccgcaacatcgtc
ggcagcctgctgatggttggcagcggcgagcagcccgaggcgtggatcgcgcagttgctc
gccggtcgcgatcgcacggtcgccggtccgaccgcgccgtcggcggggctggtgttcctc
gggccgcgctatccggcgcagtgggacttgcccgccgaggtcacgctatccgggagcgcg
ctgtga
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