Lysobacter arenosi: HIV01_003115
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Entry
HIV01_003115 CDS
T07237
Name
(GenBank) LysR family transcriptional regulator
KO
K27042
LysR family transcriptional regulator, trpBA operon transcriptional activator
Organism
lare
Lysobacter arenosi
Brite
KEGG Orthology (KO) [BR:
lare00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lare03000
]
HIV01_003115
Transcription factors [BR:
lare03000
]
Prokaryotic type
Helix-turn-helix
LysR family
HIV01_003115
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_5
HTH_20
HTH_23
MarR_2
HTH_11
HTH_30
HTH_24
Motif
Other DBs
NCBI-ProteinID:
QSX75542
LinkDB
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Position
complement(643521..644420)
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AA seq
299 aa
AA seq
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MSRDLPPLNALRAFEAVARLDSVSRAAEELHVTHGAVSRHLRALEETLGTALFVRQGRGL
ALTPAGRRLHEAAEAAFEPLRGAWAELRRRPQQAPLVLGCPGSVLARWMIPRLERLTREL
PDLKLHLSASETAPDAQMSGLDAALLISQAPWPADWQVHELAPERIGPVLSPRLEGHQRL
LSSPASALLGEPLLHTTSRPQAWQDWGIRMGLEPEALRLGTGFEHLYYLLEAAQAGLGVA
ISPEPLVAEDIAAGRLLAPWGFVATDGCWALCAPKRSSDPRVPRLARWLRAELATTSSA
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgagccgtgacctgcccccgctcaatgccctgcgcgcgttcgaggcggtcgcccggctg
gacagcgtcagccgcgcggccgaagaactccatgtcacccatggcgcggtcagccggcac
ctgcgggcgctcgaggagaccctcgggacagcgctgttcgtgcgccagggccgcggcctc
gccctcactcccgcaggccggcgcctgcacgaagccgccgaagcggccttcgaaccgctg
cgcggcgcctgggcggaactgcgtcgccgcccccaacaggcaccgctggtgctcggatgc
cccggcagcgtgctggcgcgctggatgattccgcgcctggaacggctgacgcgcgaactg
cccgatctcaagctgcacctgtcggcaagcgagacggcgccggatgcgcaaatgagcggg
ctcgatgcggcgctgctgatctcgcaagcgccatggccggcagactggcaggtgcacgag
ttggcacccgagcgcatcggaccagtcctcagcccgcgcctggaaggtcaccaacgattg
ctgtcgtcgcctgcaagcgcgctgctcggcgagccgctgctgcacacgacctcgcggccg
caggcgtggcaggactggggcattcgcatgggactggagccggaagcgcttcgtctgggc
accggcttcgaacacctgtattacctgctcgaagccgcgcaggcgggactgggcgtggcg
atcagcccggagccgctggtggccgaagacatcgccgccggtcgcttgcttgcgccctgg
ggcttcgtggcgacggatggatgctgggcgctgtgcgcgccgaagcgaagcagcgatcca
cgcgtgccgcggctggcgaggtggctgcgcgcggaacttgcgactacatcatccgcgtag
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