Lysobacter arenosi: HIV01_003630
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Entry
HIV01_003630 CDS
T07237
Name
(GenBank) rRNA pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
lare
Lysobacter arenosi
Brite
KEGG Orthology (KO) [BR:
lare00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lare03009
]
HIV01_003630
Enzymes [BR:
lare01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
HIV01_003630
Ribosome biogenesis [BR:
lare03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HIV01_003630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
QSX75632
LinkDB
All DBs
Position
complement(749281..750966)
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AA seq
561 aa
AA seq
DB search
MTEEKSRKLTLKRITDTTGEAPRLEERLHKVLAQAGLGSRRALEQRIADGLVKVNGEVAQ
VGMSVKSGDKVELDGRQFVASALTDPSRVLMYNKPEGEVTTREDPEGRPTVFESLPALKG
ARWIAIGRLDINTTGLLLLSTDGELANALMHPSFEVEREYVCRVRAPEGQDVVPENIVDR
LARGVALEDGPAKFDEIERIGGTDSHDWFRVVVKEGRNREVRRLWESQGCQVSRLKRVRY
GDVALPRELLRGQSRELASDAVEALRNKLGLEDGTPSSLTLQPVIGQRKATKATIDLTGR
ARSNGYVGGHNTADEGRELRRFDHVREDRGGRGRGGPRKHGGLTVSGEAAANQSQKPFKQ
RKEKGPKPLPDGNPAAFRTWYVPDGVSTGPSGHRNPDGRGKGPGQGRPQGGKGPRPGGGG
GRPGGGGYGGERSGGFGGEGRGGFGERGPRREGGGGGGGQGQGQRSSRPYGHPGNAPSFP
SDHANPGAFNPYGDKPRAPRPAGGRPGGGGRPGGGGPGGPGGRPGGGARPGGAGRPAGGP
RPGGPRGGGRPGGGRGPRGGA
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgactgaagaaaagagccgcaagctcaccctcaagcgcatcaccgacaccacgggcgaa
gcgccgcggctggaagagcgcctgcacaaggtcctggcacaggccggccttggctcgcgc
cgtgcgctggaacagcgcatcgccgacggcctggtgaaggtcaacggtgaagtcgcgcag
gtcggcatgagcgtcaagagtggcgacaaggtcgagctcgacggacgccagttcgtcgcc
agcgcgctgaccgatccctcgcgcgtgctgatgtacaacaagcccgaaggcgaagtgacc
acgcgcgaagaccccgaaggtcgcccgaccgtgttcgagtccctgcccgcgctgaagggc
gcccgctggatcgcgatcggccgcctcgacatcaacaccaccggcctgctgctgctgagc
accgacggtgaactggccaatgcgctgatgcacccgtcgttcgaagtcgaacgcgagtac
gtctgccgcgtgcgcgcaccggaaggccaggacgtcgttcccgagaacatcgtcgaccgc
ctcgcccgtggcgtcgcgctcgaggacggcccggccaagttcgacgagatcgaacgcatc
ggcggcaccgattcgcacgactggttccgcgtcgtggtcaaggaaggtcgcaaccgcgaa
gtgcgccgcctgtgggaatcgcagggttgccaggtcagccgcctcaagcgcgtgcgctac
ggcgacgtcgcgctgccgcgcgagctgctgcgtggccaatcgcgcgagctggcgtccgat
gcggtcgaagcactgcgcaacaagctcggcctcgaggacggtacgccgtcgtcgctgacc
ctgcagccggtgatcggccagcgcaaggcgaccaaggccaccatcgacctcaccggtcgc
gcccgttccaatggctacgtcggtggccacaacactgccgacgaaggccgtgagctgcgt
cgcttcgaccatgtgcgcgaagaccgtggcggccgtggccgtggcggcccgcgcaagcac
ggtggcctgacggtcagcggcgaagccgccgccaaccagtcgcagaagccgttcaagcag
cgcaaggaaaagggtcccaagccgttgccggatggcaatccggcggcattccgcacctgg
tacgtgccggacggtgtcagcaccggtccgagcggccaccgcaatccggatggtcgcggc
aagggtccgggccagggtcgtccgcagggcggcaagggtccgcgtccgggtggcggcggc
ggtcgtcccggtggcggcggctacggcggcgagcgttccggtggcttcggcggcgaaggc
cgcggcggcttcggcgagcgcggtccgcgtcgtgaaggcggcggtggtggtggcggccag
ggccagggacagcgcagctcgcgtccttacgggcatccgggcaacgcgccgagcttcccg
tccgatcacgccaatccgggcgccttcaatccgtacggcgacaagccgcgcgccccgcgt
ccggctggcggtcgccccggtggcggcggccgtccgggtggcggcggtcccggtggtccg
ggtggtcgtcccggcggcggtgcacgtccgggcggcgccggtcgtccggccggtggcccg
cgtccgggcggtccgcgcggtggcggacgccccggtggcggccgcggtccgcgcggcggc
gcttga
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