Lysobacter arenosi: HIV01_004135
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Entry
HIV01_004135 CDS
T07237
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
lare
Lysobacter arenosi
Brite
KEGG Orthology (KO) [BR:
lare00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lare03400
]
HIV01_004135
Enzymes [BR:
lare01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
HIV01_004135
DNA repair and recombination proteins [BR:
lare03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
HIV01_004135
Prokaryotic type
HIV01_004135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QSX75722
LinkDB
All DBs
Position
869489..870934
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AA seq
481 aa
AA seq
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MPATAASPGPPALVWFRNDLRLADNPALQAALDGGYTPIPVYIHAPDEAGDWRPGAASDA
WRHRSLDALDSGLRQRGSHLRRFFGPSLATLQSLVATTGAEAVFWNRRYEPAFEQRDARI
KQVLRGQGVHAESFNSALLFEPWTLKTQQGKPFRVFTPFWRSALANWRLEPCMEAPARLP
DSGEGPEGVPLQALRLAPARGWDSTFWESWTPGEEGALQALEAFTDGALRGYAQQRDRPD
RIGTSRLSPHLHFGEIAPWRVVAALDRLRGSAADADLDAARRELGWREFGYHLLHHFPQT
PDLNFDPKFNAFDWAQVSPSHLQAWQHGRTGVPIVDAGMRELWSTGWMHNRVRMVVASYL
TKHLRYHWRHGARWFWDTLVDADLASNTLGWQWVAGTGADAAPYFRIFNPVTQAQKFDPE
GRYIARWLPELAALPLPLRFAPWQDPATSQRLAPDYPLQPLVDLYAGRDGALKAYRQLRV
S
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcaaccgctgcgagtccggggccgcccgcgctggtctggttccgcaacgacctg
cgcctggccgacaacccggcgttgcaggccgcgctcgatggcggttacaccccgatcccg
gtctacatccatgccccggacgaagccggcgactggcggccgggtgcggcatccgatgcc
tggcggcatcgctcgctcgatgcactcgacagcggtctgcgccagcgcggctcgcacctg
cgccggttcttcggccccagcctggcgacactgcagtcgctggtcgccaccaccggtgcc
gaggcggtgttctggaatcgccgctacgagcctgcgttcgagcagcgcgatgctcgcatc
aagcaggtgctgcgcgggcagggtgtgcatgccgagagcttcaacagcgcgctgttgttc
gaaccgtggacgctgaagacccagcagggcaagccattccgcgtgttcaccccgttctgg
cgctcggcattggcgaactggcgcctggagccatgcatggaggcaccggcgcgattgccc
gacagcggcgaggggccggaaggcgtgccgcttcaggcgttgcggctggcgccggcgcgc
ggctgggacagcacgttctgggagagctggacgcccggcgaagaaggtgcgctgcaggca
ctggaagccttcaccgacggcgcgctgcgtggctacgcccagcagcgtgaccgccccgat
cgcatcggcacctcgcgactgtcgccgcacctgcacttcggcgagatcgcgccctggcgc
gtggtcgcggcgctcgatcgattgcgcggctcggccgccgatgccgacctcgacgcggcc
cggcgcgagctgggctggcgcgaattcggttaccacctgctgcatcacttcccgcaaacg
cccgatctgaacttcgacccgaagttcaatgcattcgactgggcgcaggtatcgccctcg
cacctgcaggcctggcaacacggacgcaccggcgtgcccatcgtcgacgccggcatgcgc
gagctgtggagcactggctggatgcacaaccgcgtgcgcatggtcgtggccagttacctg
accaaacacctgcgttaccactggaggcacggagcgcgctggttctgggacacgctggtc
gatgccgacctggccagcaacaccctcggctggcagtgggtggccggcaccggcgccgat
gccgcgccttacttccgcatcttcaatccggtgacgcaggcgcagaagttcgacccggaa
gggcgctacatcgcccgctggctgcccgaactggcggcgctgccgctgccgttgcggttc
gcgccctggcaggatccggcgacctcgcaacggctggcgcctgactatccgctgcagccg
ctggtggatctgtatgcagggcgtgacggcgcgttgaaggcgtaccgccagctgcgcgtc
tcgtag
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