Lysobacter arenosi: HIV01_004400
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Entry
HIV01_004400 CDS
T07237
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lare
Lysobacter arenosi
Pathway
lare03410
Base excision repair
lare03430
Mismatch repair
lare03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lare00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HIV01_004400 (recJ)
03430 Mismatch repair
HIV01_004400 (recJ)
03440 Homologous recombination
HIV01_004400 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lare03400
]
HIV01_004400 (recJ)
DNA repair and recombination proteins [BR:
lare03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
HIV01_004400 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HIV01_004400 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
HIV01_004400 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
QSX75771
UniProt:
A0ABX7RES0
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All DBs
Position
921481..923196
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AA seq
571 aa
AA seq
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MKPQARLRRRKCEQVGQWPDTLSPLLRRLYAARGATSIEQAQPRLANLLAPDELGGLDAA
VSLLSAAIAEDRHIVVVGDFDCDGATACAVGVRGLRMLGARRVSHAVPNRMVHGYGLSPA
LVEELAALQPELLVTVDHGIACHAGIAAAKARGWKVLVTDHHLPGDQLPPADAIVDPNLH
GDPFPSKVLAGVGVMFYVLLALRRHLRVQGAFAGQGPDLTTLLDLVAVGTVADLVPLDAN
NRALVAAGLRRLRAGQGSVGLRALIEVAQRDAGRLTASDIGYAVAPRLNAAGRLEDMALG
IECLLTDDLARARDIAATLNEINSERRAVQQQMTDEAEQALARVSVIEQSARSAVCLYDA
QWHPGVVGLVASKMKERLHRPVIAFAPAEPGSDTLRGSARSIPGFHIRDALADVAARHPT
LIERFGGHAMAAGLSLRAEAYPAFASAFEQVAQAALTPELLQADVLSDGELGVADFNRAS
AEALRDGGPWGQGFAEPQFDGEFDVVSWRVVGERHLKLVLGFAGVQLNAIEFGGWLGHAP
PGRLRIAYRLEPDDYRGGDAVQLVVVHSEPA
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgcaagccaggctgcgccggcgcaaatgcgagcaggtcggccaatggcccgac
accttgtcgccgctgctgcgtcgcctgtatgcggcgcgcggtgcgaccagcatcgagcag
gcgcagccgcgcctggccaacctgctggcgcccgatgagctgggtggcctcgacgccgcc
gtgtcgctgttgtcggccgcaatcgccgaggatcgccacatcgtggtggtcggtgatttc
gattgcgatggagcgaccgcctgcgctgtcggcgtacgcggtctgcgcatgctcggtgcg
cgtcgtgtctcgcacgccgtgcccaatcggatggttcacggttatggcctgtcgccggcc
ctggtggaggagctggcggcgttgcagccagagctgctggtgacggtcgatcacggcatc
gcctgccacgccggcatcgccgcggccaaggcccgcggctggaaggtgctggtcaccgac
caccaccttcctggtgatcagttgccgccggccgacgccatcgtcgatccgaacctgcac
ggcgatccattcccgagcaaggtgctggctggcgtcggcgtcatgttctacgtattgctg
gcgcttcgccgtcacctgcgcgtgcagggggcgttcgccggccaggggccggacctgacg
acgctgctcgacctggtcgctgtcggcaccgtcgccgacctggtgccactggacgcgaac
aatcgcgcgcttgtcgccgccggtctgcgccgactgcgcgcggggcagggaagcgtcggc
cttcgcgccctgatcgaagtggcgcagcgcgacgccggtcgccttaccgcctccgacatc
ggctatgccgtggccccgcgactcaatgcggccgggcgcctggaggacatggcgctcggc
atcgaatgcctgttgaccgacgacctggcgcgggcgcgcgacatcgccgccacgttgaac
gagatcaacagcgaacgccgtgccgtgcagcagcagatgaccgacgaggccgagcaggcg
ctggcgcgcgtgagcgtgatagagcaaagcgcgcgcagcgcggtctgtctctacgacgcg
caatggcatccgggcgtggtcgggctggtggcgtcgaagatgaaggagcggctgcatcgc
cccgtcatcgccttcgcgccggccgaaccgggaagcgacacgttgcgtggctcggcgcga
tcgatcccggggttccatatccgcgatgcgctggccgatgtcgccgcgcgccatccgacg
ctgatcgagcgtttcggcggccatgcgatggcggcaggtttgtccctgcgcgccgaagcc
tatccggcgttcgccagcgctttcgagcaggtcgcccaggcggcactgacgccggaactg
ttgcaggccgatgtgctcagcgatggcgagctgggggttgccgatttcaaccgcgccagt
gccgaggcgctgcgtgacggcggtccgtgggggcagggctttgcggagccgcagttcgat
ggcgagttcgacgtggtgagctggcgcgtcgtcggcgaacgccacctcaagcttgtcctc
gggtttgccggcgtgcagttgaatgcgatcgagttcggcggctggctgggccacgcgccg
ccaggtcgtctgcgcattgcctatcgcctggaacccgatgactaccggggcggcgatgcc
gtgcaactggtggttgtgcacagtgagcctgcgtag
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