Lysobacter arenosi: HIV01_006100
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Entry
HIV01_006100 CDS
T07237
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
lare
Lysobacter arenosi
Pathway
lare00541
Biosynthesis of various nucleotide sugars
lare01100
Metabolic pathways
lare01250
Biosynthesis of nucleotide sugars
Module
lare_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
lare00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HIV01_006100 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
lare01005
]
HIV01_006100 (kdsB)
Enzymes [BR:
lare01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
HIV01_006100 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
lare01005
]
Lipid A
HIV01_006100 (kdsB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
TetR_C_35
Motif
Other DBs
NCBI-ProteinID:
QSX76065
UniProt:
A0ABX7RDH9
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All DBs
Position
complement(1292177..1292947)
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AA seq
256 aa
AA seq
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MSKDFVVAIPARHAATRLPGKPLRLLAGEPLVLHVARRALAAGAREVWVAADDERIAAAI
ADCGVRVAMTSPDHASGTDRLAECARIAGWSDDTVVVNLQGDEPFAPAAGIRAVAALMHE
GDSEMATLAAPVTDVETLLDPNAVKLVRAGNGNALYFSRAPIPWPRDAFARDRSSMPTQG
EWLRHIGIYGYRAGFLQRFAALAPGRLEQIESLEQLRVLEAGYRIAVGITPEPFPPGVDT
PEDLARAEAWIAAGRG
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaggatttcgttgtcgcaatcccggcccggcatgccgccacccgcctgccaggc
aagccgctgcgcctgctggccggcgagccgctggtgctgcatgtggcccgccgcgctttg
gcggcgggcgcgcgcgaagtctgggttgccgctgatgacgagcggatcgccgcggccatc
gccgactgcggcgtgcgcgtggccatgacctcgcccgatcacgcatccggcaccgaccgc
ctcgccgagtgcgcacgcattgccggctggagcgacgacaccgtcgtggtcaacctgcag
ggcgacgaaccgttcgccccggccgccggcatccgtgccgtggcggcgctgatgcacgaa
ggcgacagcgagatggcgacgctggccgcgccggtgaccgacgtcgaaacgctgctcgat
cccaacgccgtcaagctggtgcgtgccggcaacggcaatgccctttacttcagccgcgcg
ccgattccgtggccgcgcgatgccttcgcccgcgaccgcagcagcatgccgacgcagggc
gaatggttgcgccatatcggcatctacggctaccgcgccgggttcctgcagcgattcgcg
gcgctggcgccgggacggctggagcagatcgaatcgctggagcagttgcgcgtgctcgaa
gctggctaccgcatcgcggtcgggatcacgcccgagccgttcccgcccggcgtcgacacg
ccagaggaccttgcccgtgccgaagcctggatcgccgccggccgtggctga
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