KEGG   Lysobacter arenosi: HIV01_006320
Entry
HIV01_006320      CDS       T07237                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
lare  Lysobacter arenosi
Brite
KEGG Orthology (KO) [BR:lare00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lare03400]
    HIV01_006320
Enzymes [BR:lare01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     HIV01_006320
    5.6.2.6  RNA 3'-5' helicase
     HIV01_006320
DNA repair and recombination proteins [BR:lare03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    HIV01_006320
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD WH4_Lhr Helicase_C WH3_Lhr ResIII Cas3-like_C_2 DUF5805 PhoH
Other DBs
NCBI-ProteinID: QSX76108
LinkDB
Position
complement(1338676..1343124)
AA seq 1482 aa
MPLDAFHPAVASWFAKAFPAPTPAQVQAWPAIRSGRNTLVAAPTGSGKTLTAFMTAIDGL
IRQGLANADGAGLFGNEPAAALPDETVVVYISPLKALSNDIRINLEAPLAGIRAELEAMG
LPDVEIRTAVRTGDTPQAERALTRRKPPHILVTTPESLYVLLGSESGRAMLSTVRSVIVD
EIHAVAASKRGSHLALSLERLEALAGRNLTRIGLSATQKPIEAVARFLVGGEGDEVDCKI
VDIGYTRERDLALELPPTPLSAVMSTDQWDQVYVRLADLVEQHRTTLVFVNTRRMAERAA
RHLGERLGKDAVAAHHGSLAKELRLDAEQKLKRGELRVLVATASLELGIDIGDVDLVCQL
GSPRSIAAFLQRVGRSGHHVGGVPKGRLFPQTRDELVECAALLDSVRRGELDALVMPDAP
LDVLAQQIVAEVSCREWDEDALYDWARRATPYAQLSREDFDAVVRMLAEGFTTRRGIRAG
YLHRDAVNRKLRGRKGGRMTALMSGGTIPDTADYAVVVEPESLFIGSVNEDFAIESMAGD
IFQLGNASYRILRVEPGKVRVEDAQGAPPSIPFWLGEAPGRSDELSFAVSRLREEVASRL
DASLPADGQAATPAQATSEAWLRDELGLPAAAAQQVSEYLASTHAALGAMPSQHTLVLER
FFDESGGTQLVIHTPYGSRINRAWGLALRKRFCRQFNFELQAAATEDAIVLSLSTSHSFP
LEEVSRYLHSSSAEHVLIQALLDAPMFGVRWRWAATTALALPRFVGGKKVPPQLQRMKSE
DLLATVFPDQVACAENLVGEREVPDHPLVAQTLHDCLHEAMDVEGWLRLLRAMEAGEVRI
VARDLSAPSPFAAEVLNARPYSFLDDAPLEERRTEAVQTRRYADAQSADDLGRLDASAIE
AVREEAWPQVRSVDEMHEALMGLGAVTAREVRENGWADWLARLAKDHRATALHDPSGRGG
IALSSGVAVLSGDGSDLWCAAERLPQLLTIHPQAVLKPAIEAPAEFAQQPWTREEALVEL
LRSRLTGLGPTPIQVLADDLSLPRADVEQTLLRLQSEGYVMQGRFTPGIDVDEWCERHLL
ARIHRYTLRRLRREIEPLAPRDFMRFAFDWQRVTPSARVQGPEALVGVLSQLEGYEAPAA
AWETELLPARVSDYSIAWLDDLCTSGRTLWTRLRAGSNEANAARGSTPVRSTPIILLPRR
DAATWTRLAPPAAADDAMSTRAQRVLDYLAEHGASFFDELVSGAHLLRTELEDALAELVA
RGRIHCDSYAGLRALLVPASKRPGAQTGRRRRAALFGIEDAGRWALIRRPPGSDKRDPED
VEHIARVLLRRHGVVCWRMLEREATWLPPWRELVRVYHRLEARGEIRGGRFIAGLSGEQF
ALPEAIGLMRQVRQRPHDGALVCVSAVDPLNLLGTVLTGTKVPRLAGSRIAFRDGIAVAT
LVSGEVEMLAELEPDDARAVRKALLREPDSTFAPVQVAPSHH
NT seq 4449 nt   +upstreamnt  +downstreamnt
atgcccctggatgccttccaccccgccgttgcctcctggttcgccaaggcatttcctgcg
ccgaccccggcgcaggtgcaggcgtggccggcgatccgcagcgggcgcaacaccctggtc
gccgcgccgaccggttcaggcaagacgctgaccgcattcatgaccgcgatcgacggcctg
atccgtcagggcctggcgaacgcagacggcgccgggctgttcggcaacgagccggccgcc
gcattgccggacgaaacggtggtcgtctacatctcgccactgaaggcgctgtcgaacgac
atccgcatcaacctggaggcgccgctcgccggcatccgagccgagctggaggcgatgggc
ctgcccgacgtcgagatccgcaccgcggttcgaaccggcgacaccccgcaggccgagcgc
gcgctgacacggcgcaagccgccgcacatcctggtcaccacgcccgagtcgctgtacgtg
ctgctgggatccgaatccggccgcgcgatgctgtcgaccgtccgcagtgtgatcgtcgat
gaaatccacgccgtggccgcgagcaagcgtggcagccacctggcgctgtcgctggagcga
ttggaggccttggccgggcgcaatctcacccgcatcggactgtctgcgacgcagaagccg
atcgaggcagtcgcacgattcctcgtcggcggggaaggggacgaggtcgactgcaagatc
gtcgatatcggctacacccgcgaacgcgacctcgccctcgagttgccgccgactccgctc
agcgcggtgatgtcgaccgatcagtgggaccaggtctacgtgcgcctggccgacctggtc
gagcagcaccgcaccacgctggtgttcgtcaacacgcggcgcatggccgagcgcgcggcg
cgtcacctcggcgagcgcctgggcaaggatgcggtcgccgcgcaccacggcagcctggcc
aaggaactgcgcctggatgccgagcagaagctcaagcgcggcgaactgcgcgtgctggtg
gcgacggcatcgctggagctgggcatcgacatcggcgatgtcgacctggtctgccagctg
ggttcgcctcgatccattgccgcattcctgcagcgcgtcggccgctccggtcaccatgtt
ggtggcgtgcccaagggccggttgttcccgcagacgcgcgatgaactggtcgaatgcgcg
gcgctactggactcggtgcgtcgtggcgagctggacgcgctcgtcatgcccgacgcgccg
ctcgacgtgcttgcccagcagatagtggccgaggtgtcctgccgggaatgggacgaggac
gcgctgtacgactgggcgcgtcgcgccacgccgtatgcgcagctgtcgcgcgaggatttc
gacgcggtggtgcgcatgctcgccgagggcttcaccacccgccgcggcatccgtgccggc
tacctgcaccgcgatgccgtcaaccgcaagctgcgtggccgcaagggcgggcgcatgacc
gcgctgatgtccggcggcaccattcccgacaccgccgactacgcggtggtggtggaaccg
gagtcgttgttcatcggcagcgtcaacgaagacttcgccatcgagagcatggccggcgac
atcttccagctcggcaatgccagttaccgcatcctgcgcgtggagccgggcaaggttcgc
gtcgaggatgcgcagggtgcgccaccgagcattccgttctggctcggcgaggcgcccggt
cgcagcgacgaattgtcgttcgcggtgtcgcgcctgcgcgaggaagtggcgtcgcggctc
gacgcaagcctgccggccgatggccaagcagcgacgccagcacaggcgaccagtgaagcc
tggcttcgcgacgaactcggcctgcccgcggcggccgcgcaacaggtcagcgagtacctc
gccagcacccatgccgcgctgggcgcgatgcccagccagcacacgctggtgctggaacgc
ttcttcgacgaaagcggcggcacccagcttgtcattcataccccctacggcagtcgcatc
aaccgcgcctggggcctggccctgcgcaagcgcttctgccgacagttcaacttcgaactg
caggcggcggcgaccgaggacgcgatcgtgctgtcgctgtcgaccagccacagcttcccg
ctggaggaggtctcgcgctatctgcattcctcgtctgccgagcacgtgctgatccaggcc
ctgctcgacgcgccgatgttcggcgtgcgctggcgctgggccgccacgaccgcgcttgcg
ctgccgcgcttcgtcggtggcaagaaggtgccgccgcagttgcagcggatgaagtccgag
gacctgctggcgaccgtgttccccgaccaggtcgcctgcgccgagaacctcgtcggcgag
cgcgaggtgcccgaccatccgctggtcgcgcagaccctgcatgactgcctgcacgaagcg
atggatgtcgaaggctggctgcgcctgctgcgggcgatggaggcgggcgaggtcaggatc
gtcgcgcgcgacctgagcgcgccgtcgccattcgcggccgaagtgctcaacgcgcggccg
tattccttcctcgacgacgctccgctggaagaacgccgcaccgaggccgtgcagacccgg
cgctatgccgatgcgcagagcgccgacgatctcggccgcctcgacgcatccgcgatcgag
gcggtgcgcgaagaggcatggccgcaggtgcgcagcgtcgacgagatgcacgaggcgttg
atgggcctgggcgcggtgaccgcgcgcgaagtgcgcgagaacggctgggccgactggctc
gcgcgactggcgaaggaccaccgcgccacggcgctgcacgatccgtcgggtcgcgggggc
attgccctgagctcgggagtcgccgtgctcagcggcgatggcagcgacctgtggtgcgcc
gccgaacgactgccgcagctgctgacgatccacccgcaagcggtgctgaaacccgccatc
gaggcgccggccgaattcgcgcaacagccgtggacgcgcgaagaggccctggtcgaactg
ctgcgttcgcgcctgaccggactcggaccgacgccgatacaagtgctcgccgatgacctc
tcgctgccgcgtgccgacgtcgaacagaccctgctgagactgcagagcgagggctacgtg
atgcaggggcgcttcacccccggcatcgacgtcgacgaatggtgcgaacggcatttgctg
gcgcgcatccaccgttacaccctgcgacgcctgcgtcgcgagatcgaaccgctggcaccg
cgcgacttcatgcgcttcgccttcgactggcagcgcgtcactccctctgcccgcgtccag
ggtccggaggcgctggtcggcgtgctgtcgcaactggaaggctacgaagcgccagccgcg
gcgtgggaaaccgaactgctgccggcacgcgtcagcgactactcgatcgcctggctcgac
gacctgtgcacgtcgggtcggacgctgtggacgcgcctgcgcgctggcagcaacgaggcc
aatgccgcgcgaggcagcacaccggtccgcagcacgcccatcatcctgctgccgcgtcgc
gacgcggcgacttggacacggctggcacctccggctgccgccgacgacgccatgtccacg
cgcgcgcagcgtgtcctcgactacctggccgagcacggtgcctcgttcttcgacgaactc
gtctccggtgcgcacctgctgcgtacggaactggaagacgctctggccgaactggtcgcg
cgcggacgcattcattgcgacagctacgcgggcctgcgcgcgctgctggtgccggcgtcc
aagcggcccggcgcgcagaccgggcgtcgccggcgcgcggcgttgttcggcatcgaggat
gccggccgctgggcgttgatcaggcgacctcccggtagcgacaagcgcgatccggaagac
gtggagcacattgcccgcgtcctgctgcggcgccacggcgtggtgtgctggcgcatgctc
gagcgcgaagcgacctggttgccgccgtggcgcgagctggtgcgggtttaccaccgcctg
gaggcacgcggcgagatccgcggcggccgcttcatcgccgggctgtcgggcgagcagttc
gcgctgcccgaggcgatcggactgatgcgccaggtgcggcaacggcctcacgatggcgcg
ctggtgtgcgtgtcggcggtcgacccgctgaacctgctcggcaccgtgctcaccggaacc
aaggtgccgcgcctggccggttcacgcatcgcattccgcgacggaatcgcggtggcgacc
ctggtatccggagaagtcgagatgctggcggagctcgagcccgatgatgcacgcgcggtg
cgcaaggcattgctgcgcgagccggattcgacgttcgctcccgtgcaggtcgccccttca
caccattga

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