Lysobacter arenosi: HIV01_006545
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Entry
HIV01_006545 CDS
T07237
Name
(GenBank) YadA-like family protein
KO
K21449
trimeric autotransporter adhesin
Organism
lare
Lysobacter arenosi
Brite
KEGG Orthology (KO) [BR:
lare00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lare02000
]
HIV01_006545
Transporters [BR:
lare02000
]
Other transporters
Pores ion channels [TC:
1
]
HIV01_006545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YadA_head
YadA_stalk
YadA_anchor
Motif
Other DBs
NCBI-ProteinID:
QSX76147
LinkDB
All DBs
Position
complement(1384595..1389712)
Genome browser
AA seq
1705 aa
AA seq
DB search
MNTIAGVYENQGRRRDCTVLRIAVALVFAGASPLAFAQAACTGAFTQTVTDAGSFVCGSS
ATATGGNATAFGNLAAATALGTTAIGAGAATNGLQATAIGTQVQANAEGATAVGAQSRAN
AIGATALGGFFDINNDNLVTDNERTSANFANATAIGANAQVSDVGGSAFGNQSRAALNAV
AIGQLAISTGGASVAVGQGSKAEGLESTAIGQLSVATAQNTSALGQNSQATGVQGTALGE
STVASGPQSSAIGQAARASVANTTAVGQNSTATGVRATALGQGANANSQDSVALGQAAQA
IAVNTTALGQAANASAIGATALGFQSGASGLRATALGNNSRATQTASTAIGGWIDRNGNS
VVEAGEFTSATATNATALGTASTASAADATALGFSATASATNSVALGTGSIADQPNTVSV
GTAAAQRRIVNLAPGTDPTDGVNVSQLNAVIQATEGIRYFQADGLGDGSDNASAVGTFTI
AAGSSASANGPGATALGSNSVAVGEASLAVGAFANAATDQTLAVGTGAQATVLGAQAFGI
GANAGADRSLAIGGGSQASGATSIAAGNEVVASGQSSVALGYRTSSTNTLSIGIGGWNDV
NGNNLVEAGETTLSSGQGSIAFGAAAQSTGFGTVSMGSNSTATADASTAVGTTAQATALG
SAAFGFDSRATAQAAAALGAGAYATATNSTAVGTLAQAQAANTIAIGYQSVAAATDSVVL
GTSADIAAAAVNGISIGNNSAVNSSNGLAIGTNAIVAANDPSGTPMNNGIAVGNNSRANN
ADATAVGANAIANGQNSVAFGTAANAQGPQASAIGQGARAIGSNSVALGTSALAQGNVST
ALGQNATATGSLSVSLGQSADATASEALAVGNNAQATASNATSLGRSANASQTGALALGA
DSIASAVDAFSGGRGSAAVGAGSTALGAASRAAGPDDTAIGSGAQVLADQSTAVGADSVI
AVGALRSSAFGATSNVTVSQGTALGFGSRVTAVNSVALGNASVADQANTVSVGIVGGERR
IVNVAAGIAQTDAVNVSQLTTATGGLRYFKADGLNDGSDDAVAAGTRSVAMGASSNASGA
NSVAIGMQSNALADGAFAAGFAARALTDGAVAIGRNAEARGGSSVSIGAGNTAEGNGAVA
IGDPNVATGDGAVAQGLDNTATGNGAVAIGHTNLATGQGAVALGFLSQAQEAGTLAFGNN
TVASVIGGVALGSESLSNRALAPTTGSIPAGSTAIPIDTTDATLLGAVSLGSGTSYRQII
NVADGTEAQDAVTLRQLQGALNAVTTTSTAYFHANSVLGDSLAVGTDSIAVGPTTVVNAD
NGIGIGNGAVVDAAAAGAIAIGRDTQVLLASGIAMGSQAQVNAEQGVALGAGSTANHALS
VALGSASQTTVGAQSGYTAYALAAPQNSFGEVSVGSAGAERQVTNVAAGSAVTDAVNVGQ
LSTMSQNVVTMFGGGAAVGPGGTITPPSYTIGGNVFNDVGNALANLDGRVTSIEVNGGGG
GGTGRDPRFIANGGSATASATGSNSVAAGGGASATAANSVAVGANSVADRDNTVSVGSTG
NARQVVNVAEGTAATDAVNVQQMSNQAAVTLNQANAYTDQQINQIVTLPMQAIEDLRGEV
NDEFRATDQRINRQGAMTAAMVHMASSAANIQTLNRVSVGAGYAEGEEALAVGYQRLVKR
NVSLSVGAAFSGSEQSAGVGIGIGW
NT seq
5118 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaccattgctggcgtgtatgagaaccaaggtcgtcgtcgtgattgcaccgtgctg
cggattgcagtggcgttggtgttcgccggggcatcgccactggcctttgcgcaggcagcg
tgcacgggtgcgttcacacagacggtgaccgacgccggctccttcgtctgcggcagtagc
gccaccgcgaccggcggcaacgcgaccgcgttcggcaacctcgccgccgccaccgcactg
gggacaacggccataggtgccggggcggccaccaatggcctgcaggccacggcgatcggc
acccaggtacaggccaatgccgagggtgccaccgcggttggcgcgcagtcgcgtgcgaac
gcgatcggtgcgacggcgctgggcgggttcttcgacatcaacaacgacaacctggtcacc
gacaacgaacgcaccagcgccaacttcgccaacgccaccgcgattggcgcaaatgcccag
gtcagcgacgtcggcggctccgcattcggcaaccagtcccgcgcggcgctcaatgccgtt
gccatcggacagctcgccatctccaccggcggcgcctccgtggcggtcgggcagggcagc
aaggccgaggggctggagtccactgccattggccagctcagcgtcgccacggcgcagaac
acctcggcgctgggccagaacagccaggcaacgggcgtgcagggcacggccctgggtgag
agcaccgtcgccagtggaccgcaatcgagtgcgatcgggcaggctgcccgcgcgagcgtt
gccaacaccacggcggtcggacagaactccacggccacgggcgtgcgcgctaccgcgctc
ggccaaggggccaatgccaacagccaggattcggttgcgctcggacaagcggcacaggcg
attgcggtcaacaccacggcgctggggcaggccgccaatgcctctgcgatcggagcaacc
gcgctgggattccagagcggcgccagcggcctgcgcgccacggcgctgggcaacaactca
cgtgcgacgcagaccgccagcacggcgatcggcggatggatcgaccgcaacggcaacagt
gtggtcgaggcaggtgaattcaccagcgcgaccgcgacgaatgcaaccgcactgggaacc
gcgtccactgccagcgcggccgacgcgaccgcgctgggtttctccgcgaccgcttcggca
accaactcggtggcgctcggcaccggttccatcgccgaccagcccaataccgtctcggtc
ggtaccgccgcggcgcaacgcaggatcgtcaatctcgctcccggtaccgacccgaccgac
ggcgtcaacgtcagccagctcaacgccgtgatccaggccaccgaaggcatccgttatttc
caggccgacggtctgggcgacggttcggacaatgccagtgccgtgggtaccttcaccatt
gccgctggcagcagcgcctcggccaacggtcctggcgccactgcgctgggttccaattcc
gttgcggtgggtgaggcatcgctcgcggtcggcgcattcgccaatgccgcgaccgaccag
accctggcggtcggcaccggtgcgcaggccacggtgctgggcgcgcaggcgttcggcatc
ggcgccaatgccggcgctgatcgcagcctcgcgatcggcggcggctcgcaggcgagcggc
gcgaccagcatcgcggccggcaacgaggtggtagccagcgggcagagcagcgtcgccctg
ggttatcgcacttcgtccaccaatactctcagcatcggcatcggcggctggaacgacgtc
aacggcaacaacttggtcgaggccggcgagaccacgctgtcgtcaggtcagggcagcatc
gcctttggcgcggccgcacagtcgaccggcttcgggaccgtttcgatgggttccaacagc
acggccacggccgatgcttcgactgccgtcggcacgaccgcacaggcgacggcgctggga
tcggcggcgttcggcttcgactcgcgcgcgacggcacaggctgctgcggcgctcggcgcc
ggcgcctatgccaccgcaaccaacagcaccgcggtcggcacgctggcacaggcgcaggcg
gccaacacgatcgcgatcggttaccagtcggtcgccgcggcgaccgactcggtcgtgctc
ggcaccagcgccgacatcgcggccgccgccgtcaacggcatttcgatcggcaacaacagc
gcggtcaattcgagcaatggcctggccatcggcaccaatgcgatagtcgctgcgaacgat
cccagtggcacgccgatgaacaatggcatcgcggtcggcaacaacagccgcgccaacaat
gccgatgccacggcggtgggcgccaacgcgatcgccaacggccagaacagcgtcgccttc
ggcaccgcggccaatgcgcaggggccgcaggccagcgcgatcggccagggcgcacgcgcg
atcggcagcaactcggtggcgttgggcacctcggcgctggcgcaaggcaacgtcagcacc
gcgctcggccagaacgccactgcgaccggttcgctcagtgtttcgctgggacagtctgcc
gatgccaccgccagcgaggcgctggcggtcggcaacaacgcgcaggcgaccgcatccaat
gcgacctcgctggggcgttcggccaatgcctcgcagaccggcgcactggcactgggcgcg
gactcgatcgcttcggccgtcgatgcgttctccggcggtcgcggcagcgccgcggtcggt
gccggcagcaccgcgctcggcgcggccagccgggctgccggtcccgacgataccgccatc
ggcagcggtgcacaggtgctggccgaccagagcacggccgtgggtgccgacagcgtcatc
gccgtcggtgcgttgcggtcgtcggccttcggtgcgaccagcaacgtcaccgtttcacaa
gggacggcgctgggttttggcagccgcgtgaccgcagtcaactcggttgccctcggcaat
gcgtccgtcgccgaccaggccaataccgtttcggtcggcatcgtcggtggcgagcgcagg
atcgtcaacgtcgccgccggcatcgcgcagaccgatgccgtcaatgtcagccagctcacg
acggctaccggtggcctgcgctatttcaaggccgacggcctcaacgatggcagtgacgac
gcggtcgcggccggcacgcggtcggtcgcgatgggggcatcgtccaatgccagcggcgca
aatagtgtagccatcggcatgcaatcgaatgccttggcagacggtgcgttcgctgccggg
ttcgccgcccgtgcactgaccgatggcgcggtcgccatcggtcgcaatgccgaagcccgc
ggtggcagctcggtgtcgatcggtgccggcaataccgccgagggcaatggcgcggtggcc
attggcgatcccaatgtcgccaccggcgacggcgccgtcgcccagggcctggacaacacc
gccaccggcaacggtgcggtggccatcggccacacaaacctcgcgaccgggcagggtgcg
gttgcgctgggtttcctgtcgcaggcgcaggaggccggaacactggcctttggcaacaac
acggtggcgtccgtgatcggtggggtcgcactgggttccgagtcgctctccaatcgcgca
ctcgcaccgaccacgggatcgatcccggccggttcgacggccattcccatcgataccacc
gatgcgacgctgctgggcgcggtctcgctcggttcgggcacctcctatcgccagatcatc
aatgtcgccgacggtacggaagcacaggacgccgtgaccctgcggcagttgcagggcgcg
ttgaacgcggtcacgacgaccagcacggcctacttccacgccaactcggtgctcggcgat
tcgctcgcggtcggcactgattcgatcgcggttggaccgaccaccgtggtcaacgccgac
aacggtatcggcatcggcaatggcgccgtggtcgacgcggcggctgcgggggcgatagcg
atcggtcgcgacacgcaggtgctgctcgcttcgggcatcgcgatgggcagccaggcccag
gtcaacgccgagcagggcgtggcgctgggtgcgggttccaccgcgaaccatgccctgagc
gtcgcgcttggttcggcatcgcagaccaccgtcggtgcgcagagcggctacaccgcctat
gcgctggccgccccgcagaactcgttcggcgaggtctcggtgggcagtgccggcgcggag
cgccaggtcaccaatgtcgcagcgggcagtgccgtcaccgatgcggtcaacgtcggccag
ctgtcgaccatgagccagaacgtggtgacgatgttcggcggcggcgcggcggtcggcccg
ggcggcacgatcacgccgcccagttacaccatcggcggcaacgtgttcaacgatgtcggc
aacgcactggccaacctggacggtcgcgtgaccagcatcgaggtcaacggcggcggtggt
ggtggcaccggccgcgatccgcgtttcatcgccaacggcggcagcgccacggcctcggcg
accggcagcaacagcgtggccgccggtggcggtgccagcgcgaccgccgccaacagcgtt
gccgtcggcgcgaactcggtcgccgaccgtgacaacacggtctcggtaggttccaccggc
aatgcccgccaggtggtcaatgtcgcggagggaaccgcggcgaccgatgcggtcaacgtc
cagcagatgtcgaaccaggcggcggtgacgctcaaccaggccaacgcctacaccgaccag
cagatcaaccagatcgtcactctgccgatgcaggcgatcgaggacctgcgcggcgaggtc
aacgacgagttccgcgccaccgaccagcgcatcaaccgccagggcgcgatgaccgcggcg
atggtgcacatggccagcagcgcggccaacatccagaccctcaaccgcgtttcggtcggc
gccggctatgcggaaggcgaggaggcattggcggtcggctatcagcgactggtcaagcgc
aatgtctcgctgtcggtgggcgcggcgttcagtggcagcgagcagtcggccggcgtcggt
atcggcatcggctggtga
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