Lysobacter arenosi: HIV01_006960
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Entry
HIV01_006960 CDS
T07237
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
lare
Lysobacter arenosi
Pathway
lare02024
Quorum sensing
lare03060
Protein export
lare03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
lare00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
HIV01_006960 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HIV01_006960 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HIV01_006960 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
lare02044
]
HIV01_006960 (ffh)
Enzymes [BR:
lare01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
HIV01_006960 (ffh)
Secretion system [BR:
lare02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
HIV01_006960 (ffh)
Eukaryotic Sec-SRP protein
HIV01_006960 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
CbiA
AAA_22
AAA_33
AAA_16
cobW
YqeC
ABC_tran
KTI12
Helicase_RecD
DO-GTPase1
APS_kinase
AAA_31
AAA_14
ParA
DnaB_C
ResIII
AAA_19
AAA_17
TsaE
Thymidylate_kin
AAA
ATP_bind_1
SR_plectin_7
ATPase
ArsA_ATPase
nSTAND3
NACHT
NPHP3_N
AAA_28
GTP_EFTU
AAA_7
Arf
AAA_24
SRPRB
Rad17
Diphthamide_syn
AAA_5
AAA_18
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
QSX76225
LinkDB
All DBs
Position
complement(1475643..1477010)
Genome browser
AA seq
455 aa
AA seq
DB search
MFESLTQRLSGTIERLRGRGRLTEENIRESLREVRIALLEADVALPVVQALIERIKVRAV
GQEVLKSLTPGQALIKIVRDEMSAVMGSAASDLNLNVPAPAVILMAGLQGAGKTTTVAKL
AKHLKEKRKKKVMVVSADVYRPAAIEQLKTLAQQVDVLFFPSSADQKPEAIVKAAIDDAR
KSYVDVLLVDTAGRTSIDEAMMAEIKALHAAVKPVETLFVVDSMTGQDAAVTAKHFGEAL
PLTGVVLTKTDGDARGGAALSVRYITQRPIKFIGTGEKPDGLDVFHPDRIASRILDMGDV
LSLVEQVEQQVDKDKAQKLAEKVAKGKKFDLNDMKDQLEQMQNMGGLHGLMDKLPGMGQI
PDSVKSEVTGKEVPRMVAIINSMTKKERRNPALLNGSRRARIAKGAGLTPADVNKLMKQF
QQMEKMMSKLSGGGMKGLMRGMKGMMGARGGMPFR
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaatccctgacccaacgtctctccggcaccatcgagcgccttcgcggccgtggc
cggctgaccgaggagaacatccgcgagtcgctgcgcgaagtccgcatcgccctgctcgag
gccgacgtggccctgccggtggtgcaggccctgatcgagcgcatcaaggtgcgcgcggtc
ggccaggaagtgctcaagtcgctgaccccgggccaggcgctgatcaagatcgtccgcgac
gaaatgtcggcggtgatgggctcggccgcgtccgacctcaacctcaacgtgccggcaccg
gccgtgatcctgatggccggcctgcagggcgcgggcaagaccaccacggtggccaagctc
gccaagcacctgaaggaaaagcgcaagaagaaggtgatggtggtgtcggccgacgtctac
cgtccggccgcgatcgagcagctcaagacgctggcgcagcaggtcgacgtgctgttcttc
ccgtcgagcgccgaccagaagcccgaggcgatcgtcaaggccgccatcgacgatgcgcgc
aagtcctacgtcgacgtgctgctggtcgacaccgccggccgcaccagcatcgacgaagcg
atgatggccgagatcaaggcgctgcacgccgcggtcaagccggtggaaacgctgttcgtg
gtcgactcgatgaccggccaggacgccgcggtcaccgccaagcatttcggtgaagcgctg
ccgctgaccggcgtggtgctgaccaagaccgatggtgacgcccgtggcggcgccgcgctg
tcggtgcgctacatcacccagcgcccgatcaagttcatcggcaccggcgagaagcccgac
ggcctcgacgtgttccacccggaccgcatcgccagccgcatcctcgacatgggcgacgtg
ctgtcgctggtcgaacaggtcgagcagcaggtcgacaaggacaaggcgcagaagctcgcc
gagaaggtcgccaagggcaagaagttcgacctcaacgacatgaaggaccagctcgagcag
atgcagaacatgggcggcctgcacggcctcatggacaagctgccgggcatgggccagatc
ccggattcggtgaagagcgaggtcaccggcaaggaagtgccgcggatggtggccatcatc
aattcgatgaccaagaaggagcgccgcaacccggcgctgctgaacggctcgcgccgcgcc
cgcatcgccaagggcgccggcctgaccccggccgacgtcaacaagctcatgaagcagttc
cagcagatggaaaagatgatgagcaagctgtccggcggcggcatgaagggcctgatgcgg
ggcatgaagggcatgatgggcgcccgcggcggcatgccgttcaggtaa
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