Lysobacter arenosi: HIV01_007140
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Entry
HIV01_007140 CDS
T07237
Symbol
speC
Name
(GenBank) ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
lare
Lysobacter arenosi
Pathway
lare00330
Arginine and proline metabolism
lare00480
Glutathione metabolism
lare01100
Metabolic pathways
lare01110
Biosynthesis of secondary metabolites
lare04148
Efferocytosis
Module
lare_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
lare00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
HIV01_007140 (speC)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
HIV01_007140 (speC)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
HIV01_007140 (speC)
Enzymes [BR:
lare01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
HIV01_007140 (speC)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
QSX76256
LinkDB
All DBs
Position
complement(1517802..1520051)
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AA seq
749 aa
AA seq
DB search
MSIPLERFFRILVVGEHTGVVAQVIEDELHFPVTSIDLEQIPQAIRGGADLGAIIVARDG
AQAVVDARDERGLRMPIFMISGRDDEALDEPFLKALDGVLIADLETRDFYEKRLVASIER
YALSLRTPFFGELMKYDYDANRTWACPGHQGGQMFMRHPVGRLFYEHMGENVFRDDICNA
MVALGDLLIHEGPALAAQRGAAKVFQSDRTYFVLNGTSSSNKVVNTSLLRSKDIVLFDRN
NHKSNHHGALMMAGAIPIYLETDRNGFGMVGPIDWSAFDEASIRDKLKNHPRLAGTDAWK
RERPIRVAIIEQCTYDGTVYNARKVLEKIGHLCQYIHFDEAWAGFGAFHPLMKDHFSMGL
KLDADSPGVIATQSTHKQLAGFSQASQIHVRDAHIRDKPFRVNHKRFNEMFMLQASTSPF
YPLFSSLDVNAQMHADKAGRVLWDDMVKLGIEGRKAVRKRFPGFINPFVPDQVDYQGRSV
AWEDVPTEVLAREQAYWQLAPGASWHGFRNLGEDAAMVDPTKLMLTTAGIDAASGNYAKT
GVPATILANFLRENNVIPEKNDLYSILFLMTPAVGEGKMAMLLAALERFRDHYEADSPLA
EVVPGLYQRNEARYRDYSLRQVAQEMHDYFVAKNIKELQRLSFRYESFPEQAMSAREANE
ALVGGEVDFVPMSEVSGRIAATLALIYPPGIGIIIPGERYDAKAKPMIDYFLAFEENCNR
FPGFSYEVQGVYQVHEEGRIRFYTYVVQE
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgagcattccccttgaacgcttctttcgtatcctggttgtcggcgaacacactggtgtt
gtcgcccaggtgatcgaggacgagctgcacttcccggtgacatcgatcgacctggaacag
attccgcaggcgatccgtggtggcgccgatctcggcgcgatcatcgtcgcccgcgacggg
gcccaggcagtggtggacgcacgcgacgagcgcggcctgcgcatgccgatcttcatgatc
agcggtcgcgatgacgaagcgctggacgagccgttcctgaaggcgttggacggtgtgctg
atcgccgacctggaaacccgcgatttctacgagaagcgcctggttgcctcgatcgagcgc
tatgcgctgagcctgcgcacgccgttcttcggcgaactgatgaagtacgactacgacgcc
aaccgcacttgggcctgcccgggccaccagggcgggcagatgttcatgcgccatccggtc
ggccggctgttctacgagcacatgggcgagaacgtgttccgcgacgacatctgcaacgcg
atggtggcgctcggcgacctgctgatccacgaagggccggcgctggcggcgcagcgtggt
gcggccaaggtcttccagtccgaccgcacctatttcgtcctcaacggcacgtcctcgtcc
aacaaggtggtcaacacctcgttgctgcgcagcaaggacatcgtgctgttcgaccgcaac
aaccacaaatccaaccaccacggcgcgctgatgatggccggcgcgattccgatctatctg
gagaccgatcgcaacggcttcggcatggtcgggccgatcgactggtcggcattcgacgaa
gcgtcgatccgcgacaagctcaagaaccatccgcgcctggccggaaccgatgcctggaag
cgcgagcgcccgatccgcgtggcgatcatcgagcagtgcacctatgacggcaccgtctac
aacgcccgcaaggtgctggagaagatcggccacctgtgccagtacatccacttcgacgaa
gcctgggccggattcggtgcgttccatccgctgatgaaggatcacttcagcatggggctg
aagctggacgccgactccccgggcgtcatcgccacccagtcgacgcacaagcagctggcc
gggttctcgcaggcctcgcagatccacgtgcgtgacgcccacatccgagacaagccattc
cgggtcaaccacaagcgcttcaacgagatgttcatgctgcaggcatcgacatcgccgttc
tacccgctgttctccagtctcgacgtcaacgcgcagatgcacgccgacaaggcgggccgc
gtgctgtgggacgacatggtcaagctcggcatcgagggccgcaaggcggtgcgcaagcgc
ttccccggcttcatcaacccgttcgtgccggaccaggtcgactaccagggccgcagcgtg
gcctgggaggacgtgccgaccgaggtgctggcgcgcgaacaggcctactggcagctggcg
ccgggcgcgtcctggcacggcttccgcaacctgggcgaagacgcggcgatggtcgatccg
accaagctgatgctgaccacggccgggatcgatgcggccagcggcaattacgccaagacg
ggggtgccggccacgatcctcgccaacttcctgcgcgagaacaatgtcatcccggagaag
aacgacctctacagcatcctgttcctcatgaccccggcggtgggcgagggcaagatggcg
atgctgctggccgcgctcgaacgcttccgcgaccactacgaggccgacagcccgctggcc
gaggtcgtgcccggcctgtaccagcgcaacgaagcgcgctatcgcgactactcgctgcgc
caggtcgcgcaggagatgcacgactacttcgtcgccaagaacatcaaggagctgcagcgg
ctcagtttccgctacgagtcgttcccggaacaggccatgtccgcgcgcgaggcgaacgag
gcgctggtcggcggcgaggtcgacttcgtgccgatgagcgaggtgtccggccggatcgcg
gcgacgctggcgctgatctatccgccgggcatcggcatcatcattcccggcgagcgctat
gacgcgaaggccaagccgatgatcgactacttcctggcgttcgaggagaactgcaaccgg
ttcccgggattctcgtacgaggtccagggcgtctaccaggtgcacgaagaaggtcgtatc
cgcttctacacctacgtcgtgcaggaatga
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