Lysobacter arenosi: HIV01_007500
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Entry
HIV01_007500 CDS
T07237
Symbol
bamA
Name
(GenBank) outer membrane protein assembly factor BamA
KO
K07277
outer membrane protein insertion porin family
Organism
lare
Lysobacter arenosi
Brite
KEGG Orthology (KO) [BR:
lare00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
lare03029
]
HIV01_007500 (bamA)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lare02000
]
HIV01_007500 (bamA)
Mitochondrial biogenesis [BR:
lare03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
HIV01_007500 (bamA)
Transporters [BR:
lare02000
]
Other transporters
Pores ion channels [TC:
1
]
HIV01_007500 (bamA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
POTRA
YqfD
DUF2255
Motif
Other DBs
NCBI-ProteinID:
QSX76319
LinkDB
All DBs
Position
1604023..1606497
Genome browser
AA seq
824 aa
AA seq
DB search
MTRTPNRRLLALALVAALNSTALPALAQSVDPFALSGAPDTTGAQVAPIGSFTVSDIRID
GLQRISAGTVFTYLPVERGDTMDSSQAGDAIRALYKTGFFEDVKVGRQGTILVITVTERP
AINKLTLTGNKDIKSEDLLKGLKEAGLSEGDTFDRLALDRVTQELTRQYNNRGKYNVEIN
PTVSRLDRNRVDVTITVKEGKAAKIRHVNLIGNEKFEDEAILEQWESREHNWLSWYKRDD
QYSREKLSGDLEKLNSWYLDRGYVDFAVDSTQVSISPDRQDMFLTAGVTEGEQYKVSTVQ
VTGDTILPKEQIERLVLVKPDQIFSRRLLEISSDSIIATLSNVGYAFAQVNPIPDVHRED
KTVGINMQVVPGPRVNVRRIAFKGNSRTSDEVIRREMRQFEGSWYSQAAIDRSKIRLQQL
GYFETVDVETVPVAGSNDEVDVVYNLKETTSGSFVFGLGFSQLSGLTAQIQLSQTNFLGS
GNQVSVQAQRNDYMQRYDFSFRNPYFTDNGLSLGYNLWWRELDYSDFNTAQYSTNSGAAQ
AVFGLPITETDTVTAMLGVDTNEILVFADTPPSIVDYVNALDRNTFHAWRGEIGWGRNSL
DSFLTPTRGMQQRVWLETTLPGSTVEYYKLNYNISKFWPLNRHLVLNTRAELGYGDSYGD
ATTRDLCRTPGNYVCPPGSPDFVRTITADGLPFFENFYAGGVRSVRGFTDNTLGPREFGQ
PLGGAFKTVGSLEMYFPTLLDTPAARVSAFVDFGNVYKDYDSFDAGELRASTGIALMWRS
PMGPISISYAYPLKSQDDVRNENGTLIEQGDELERLQFTFGGTF
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgaacccctaaccgccgcctgcttgccctcgccctcgtcgcggcgctgaattcc
acagccctgcccgcgctggcgcagtcggtggatccgttcgcactgtcgggcgcaccggac
acgaccggcgcgcaggtcgcgccgatcggttcgttcaccgtcagcgacatccgcatcgat
ggcctgcagcgcatctccgccggtacggtcttcacctacctgccggtcgagcgtggcgac
acgatggacagttcgcaggcgggcgacgcgatccgcgcgctgtacaagaccggcttcttc
gaggacgtcaaggtcggccgccagggcaccatcctggtgatcaccgtcaccgaacgcccg
gccatcaacaagctgacgctgaccggcaacaaggacatcaagtccgaggacctgctcaag
ggcctgaaggaagccggcctgtcggaaggcgataccttcgaccgcctcgccctggaccgc
gtgacccaggaactgacccgccagtacaacaaccgcggcaagtacaacgtcgagatcaat
ccgaccgtgtcgcgactcgaccgcaaccgcgtcgacgtcaccatcaccgtcaaggaaggc
aaggcggccaagatccgccacgtcaacctgatcggcaacgagaagttcgaggacgaggcc
atcctggagcagtgggaatcgcgcgagcacaactggctcagctggtacaagcgcgatgac
cagtactcgcgcgagaagctgtcgggcgacctggaaaagctcaactcctggtacctcgac
cgcggctacgtcgacttcgccgtcgactcgacgcaggtgtccatcagccccgaccgccag
gacatgttcctcaccgccggcgtgaccgagggcgagcagtacaaggtgtccaccgtgcag
gtcaccggcgacacgatcctgccgaaggagcagatcgagcgcctggtgctggtcaagcct
gaccagatcttctcccgtcgcctgctcgagatcagctccgactcgatcatcgccacgctc
agcaacgtcggctacgccttcgcacaggtcaatccgatcccggacgtccatcgcgaagac
aagaccgtcggcatcaacatgcaggtcgtgcccggtccgcgcgtcaacgtgcgccgcatc
gccttcaagggcaacagccgcaccagcgacgaagtgatccgccgcgagatgcgccagttc
gaaggctcctggtactcgcaggcggcgatcgaccgttccaagatccgcctgcagcagctg
ggctacttcgagaccgtcgacgtcgagaccgtgccggtcgccggcagcaacgacgaagtc
gacgtggtctacaacctgaaggaaaccacctcgggcagcttcgtgttcggcctgggcttc
tcgcagctgtcgggcctgaccgcgcagatccagctgtcgcagaccaacttcctcggcagc
ggcaaccaggtgtcggtgcaggcgcagcgcaatgactacatgcagcgctacgacttctcg
ttccgcaacccgtacttcaccgacaacggcctgtcgctgggctacaacctgtggtggcgc
gaactcgattactccgacttcaacaccgcccagtactcgaccaactccggcgcagcgcag
gcggtcttcggcctgccgatcaccgagaccgacacggtcacggcgatgctgggcgtggac
accaatgaaatcctggtgttcgccgacacgccgccgagcatcgtcgactacgtcaatgcg
ctcgaccgcaatacattccatgcctggcgcggtgaaatcggctggggtcgcaactcgctc
gacagcttcctgaccccgacccgcggcatgcagcagcgcgtctggctggaaaccaccctg
cccggctcgaccgtcgagtactacaagctcaactacaacatctccaagttctggccgctc
aaccgccacctggtgctcaacacgcgcgccgaactgggctacggcgacagctacggcgac
gccaccacgcgcgacttgtgccgcacgccgggcaattacgtctgcccgccgggcagtccg
gacttcgtgcgcaccatcaccgccgatggcctgccgttcttcgagaacttctacgccggt
ggtgtgcgctcggtccgcggcttcaccgacaacaccctgggtccgcgcgaattcggccag
ccgctcggcggcgcgttcaagacggtcggctcgctggaaatgtacttcccgaccctgctc
gacacgccggccgcgcgtgtttccgcgttcgtcgacttcggtaacgtctacaaggactac
gacagtttcgatgcgggcgagctgcgtgcttcgaccggtatcgcgctgatgtggcgctcg
ccgatgggcccgatctcgatcagctatgcgtacccgctcaagagccaggacgacgtgagg
aacgagaacggcaccttgatcgagcagggggacgaactggagcgcctgcagttcaccttc
ggcggcacgttctaa
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