Lysobacter arenosi: HIV01_008545
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Entry
HIV01_008545 CDS
T07237
Name
(GenBank) outer membrane beta-barrel protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
lare
Lysobacter arenosi
Brite
KEGG Orthology (KO) [BR:
lare00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lare02000
]
HIV01_008545
Transporters [BR:
lare02000
]
Other transporters
Pores ion channels [TC:
1
]
HIV01_008545
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OMP_b-brl
OmpA
Autotransporter
DUF748
DUF3575
DUF481
Omp85
LolB
Motif
Other DBs
NCBI-ProteinID:
QSX76502
LinkDB
All DBs
Position
complement(1838502..1839581)
Genome browser
AA seq
359 aa
AA seq
DB search
MKTRLLSTALLAGLAFSQVASAQEFDDRWYLTGTAGMNIQDNDRGTRNAPFGALGVGKFL
NPNWSLDGELNYQNPNNDANQNLNWSQYGISFDLRRHFLAEGRNWAPYLLMGLGYQQSEE
EFDSFPNPNSPSQRDEGNLAAKVGVGLQTALGERVSLRTELAYRADFDDGSVAAPNEDWF
GDMLASVGVVIPLGALPVAAAPAPAAPSCADLDDDGDGVNNCDDKCPGSQAGQTIGPDGC
PVPVSIDLKGVNFDFDKATLRPDAVSILSEATEILKRYPELKVEVAGHTDLCGKDAYNQK
LSERRATTVYDYLTSNGVDAARLVGPIGYGESRPLEPTEQTMPACKNEKNRRTELNVQN
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgaagacccgtttgttgagcaccgccctgctggccggcctggctttttcccaggtcgcc
agcgcccaggaattcgatgaccgctggtacctgaccggcactgccggcatgaacatccag
gacaacgaccgtggcacccgcaatgcgccgttcggtgcgctgggcgtcggcaagttcctg
aacccgaactggtcgctcgatggcgagctcaactaccagaacccgaacaacgacgccaac
cagaacctcaactggagccagtacggcatctcgttcgacctgcgccgccacttcctggcg
gaaggccgcaactgggcgccgtacctgctgatgggcctgggttaccagcagtcggaagaa
gagttcgactcgttcccgaacccgaactcgccgagccagcgtgacgagggcaacctcgcc
gccaaggtcggcgtcggcctgcagaccgccctgggcgagcgcgtgtcgctgcgcaccgag
ctggcctaccgcgccgatttcgacgacggcagcgttgctgctccgaacgaagactggttc
ggcgacatgctggcttcggtcggcgtcgtgatcccgctgggcgccctgccggtcgctgcc
gcgccggctccggccgcgccgagctgcgccgacctggacgacgacggtgacggcgtcaac
aactgcgacgacaagtgcccgggttcgcaggccggccagaccatcggtccggacggttgc
ccggtgccggtgtcgatcgacctgaagggcgtgaacttcgacttcgacaaggccacgctg
cgtccggatgcggtctcgatcctgtccgaggccaccgagatcctgaagcgctatccggag
ctgaaggtcgaagtcgccggtcacaccgacctgtgcggcaaggatgcgtacaaccagaag
ctgtcggagcgtcgcgccaccacggtgtacgactacctgaccagcaatggcgtggacgcc
gctcgcctggtgggcccgatcggttacggcgagagccgtccgctggagccgaccgagcag
accatgccggcctgcaagaacgagaagaaccgtcgtaccgagctgaacgtgcagaactaa
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