Lysobacter arenosi: HIV01_009765
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Entry
HIV01_009765 CDS
T07237
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
lare
Lysobacter arenosi
Pathway
lare02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
lare00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HIV01_009765
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
lare02022
]
HIV01_009765
02035 Bacterial motility proteins [BR:
lare02035
]
HIV01_009765
Two-component system [BR:
lare02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
HIV01_009765
Bacterial motility proteins [BR:
lare02035
]
Pilus system
Twitching motility proteins
HIV01_009765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_16
AAA_5
HTH_50
Mg_chelatase
VpsR
HTH_30
Motif
Other DBs
NCBI-ProteinID:
QSX73543
LinkDB
All DBs
Position
2088533..2089981
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AA seq
482 aa
AA seq
DB search
MAETRSALVVDDERDIRELLVMTLGRMGLRCDTASTIGEARSQLSRNRYDLCLTDMRLPD
GSGMDLVAEISQKHPETPVAMITAFGNVEAAVEALKAGAFDFVAKPVDLAVLRDLVRHAL
DLNESRRSAPPADAVAARLYGQSPAMTTLRQTIAKVARSQAPVYIVGESGVGKELVARTI
HAEGGRASGPFVPVNCGAIPAELMESEFFGHKKGSFTGAHADKPGLFQSADGGTLFLDEI
AELPLAMQVKLLRAIQEKSIRPVGANSEVPVDVRILSATHKDLASLVADGRFRQDLYYRI
NVIELRVPPLRERQDDLPGLVLMVLKRLATAQSRPVPALSDDALGVLRSYAFPGNVRELE
NILERALALAEDEILTAEDLRLPQVAQAQSAVFPNTGNATTAASPAPAPIAVAGQPMMAI
DPRTLNPRDTASSPLPSYIEEIERAAIQQALQENRYNKTRTAAALGITFRALRYKLKKLG
ID
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaacacgtagtgcactggtggtcgacgacgaacgcgacattcgcgagttgctc
gtcatgacattggggaggatgggattgcgttgcgacaccgcctccaccatcggggaggca
cgcagccagctgtcccggaatcgctacgacctgtgcctgaccgacatgcgcctgcctgac
ggctcgggcatggacctggtcgccgagatcagccagaagcaccccgagaccccggtcgcc
atgatcaccgccttcggcaatgtcgaagccgcggtcgaggcattgaaggccggtgcgttc
gacttcgtcgccaaacccgtcgacctggccgtgttgcgcgacctggtccgccacgccctg
gacctcaacgaaagccgccgcagcgcgccgccggccgacgccgtcgccgcccgcctgtac
ggccagtcgccagccatgaccacgctgcgccagacgattgccaaggtcgcgcgcagccag
gcgccggtctacatcgtcggcgagtcgggcgtgggcaaggagctggtcgcccgcaccatt
cacgccgaaggcggccgcgccagcggaccgttcgtcccggtcaactgcggcgcgatcccg
gccgagctgatggagagcgagttcttcggccacaagaagggcagcttcaccggcgcccat
gccgacaagcccggcctgttccagagcgccgatggcggcaccctgttcctcgacgaaatc
gccgagctgccgctggcgatgcaggtcaagctgctgcgtgccatccaggaaaagtcgatc
cgcccggtcggtgccaacagcgaagtgccggtggatgtacgcatcctctcggccacgcac
aaggacctggcctcgctggtcgccgatggtcgcttccgccaggatctttactaccgcatc
aatgtgatcgagctgcgcgtgccgccgcttcgtgagcgccaggatgacctgcccggcctg
gtgctgatggtgctcaagcgcctcgccacggcgcagtcgcgcccggtgcccgcgctgagc
gacgacgccctcggggtcctgcgcagttatgcgttcccgggcaacgtgcgcgaactggag
aacatcctcgagcgtgcgcttgcgcttgccgaagacgagatcctgacggccgaagacctg
cgcctgccacaggtcgcccaagcccagagcgcggtgttcccgaacacgggcaacgccacg
accgccgcatcgccagcgcccgccccgatcgcggtggccggccagccgatgatggcgatc
gacccgcgcacgctcaatccgcgcgataccgccagcagcccgctcccctcttatatagag
gagatcgagcgcgcggcgatccagcaggcgctgcaggaaaaccgctacaacaagacccgt
actgcggccgcgctcggcattaccttccgcgcgctgcggtacaagctgaagaaactcggg
atcgattga
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