Lysobacter arenosi: HIV01_011055
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Entry
HIV01_011055 CDS
T07237
Name
(GenBank) glycoside hydrolase family 43 protein
KO
K01198
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
lare
Lysobacter arenosi
Pathway
lare00520
Amino sugar and nucleotide sugar metabolism
lare01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lare00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
HIV01_011055
Enzymes [BR:
lare01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
HIV01_011055
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_43
GH43_C2
Big_6
Motif
Other DBs
NCBI-ProteinID:
QSX73775
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Position
complement(2353518..2355203)
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AA seq
561 aa
AA seq
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MNPSRKMVPLLLALSAVAAGSGHAQAREPVLFDWFEYRGHDATFEQPLPEGSFRNPVLAG
FHPDPAVVRARDRYYLVNSSFSYFPGIPVFESRDLVHWTQIGNAIERPSQLDFDGLGMSR
GVFAPTIAYHDGTFYVVNTAVDNGGNFLVTAKDPAGPWSDPVWLPTIDGIDPSLFFDSDG
KTYLLNNGEPEGKPRYDGHRAIWMQEFDLAQRKPVGPRKVLIDGGVDPSKNPIWIEGPHI
YQREGWYYLVCAEGGTGPDHSQVVLRSRSVWGPYAPYPGNPILTQRDLDPERANPITNAG
HADLVEGLDGSWWAIFLASRNYGGVHYNTGRETYLLPVTWKDGWPLILEHGRAIPQVLPG
PGFMEGGKSQAPMTGNFTWRDDFDKPTLDRAWMHVRVPKQPWADLAAKPGQLAIHPLAEG
LNTLRNPSFLARRQQHLAFESSTALTVPVEAGTEAGIVAFQNERHWYFLGVRRAGAGLEL
FLQRSSDGKASIVATKAIANAKTLKLKITGDSGAYSFGFDADGKGWQWLRRNEDGTILST
DVAGGFVGAVVGPYARTETNK
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgaatccgtcgaggaagatggttccgttgctgctggcgctgtcggccgttgcagcaggc
tcggggcacgcccaggcgcgcgagccggtcctgttcgactggttcgagtaccgcggccac
gacgccacgttcgagcaaccgttgccggaagggagcttccgcaatccggtgcttgccggg
ttccatcccgatccggcggtggtccgcgcgcgtgatcgctattacctggtcaattccagc
ttctcctacttcccgggcatcccggtgttcgaaagccgcgacctggtgcactggacgcag
atcggcaacgcgatcgagcggccgtcgcagctggacttcgatggcctgggcatgtcgcgt
ggcgtgttcgcaccgacgatcgcctaccacgacggcaccttctatgtcgtcaacaccgcg
gtcgacaacggcggcaacttcctggtgacggcgaaggatccggccggcccgtggtccgat
ccggtctggttgccgaccatcgacggcatcgatccgtcgctgttcttcgacagcgacggc
aagacctacctgctcaacaacggcgagccggaaggcaagccgcgctacgacggccaccgt
gcgatctggatgcaggagttcgacctggcgcagcgcaagccggtcggtccgcgcaaggtg
ctgatcgacggcggcgtcgatccgtcgaagaacccgatctggatcgaaggtccgcacatc
taccagcgcgaaggctggtactacctggtctgcgccgagggcggcaccggcccggatcat
tcgcaggtggtgctgcgcagtcgcagcgtgtggggtccgtatgcgccgtacccgggcaac
ccgatcctgacccagcgcgatctcgatccggagcgtgccaacccgatcaccaacgccggc
cacgccgacctggtcgaagggctcgacggcagctggtgggcgatcttcctcgccagccga
aactacggcggcgtgcattacaacaccgggcgcgagacctacctgttgccggtcacgtgg
aaggacggctggccgttgatcctcgagcatggacgggcgatcccgcaggtgttgcccggc
ccgggcttcatggaaggtggcaagtcgcaggcgcccatgaccggcaacttcacctggcgc
gacgatttcgacaagcccacgctcgatcgcgcgtggatgcatgtgcgagtgccgaagcag
ccctgggccgacctggcagcgaagcctggccagttggcgatccatccgctcgcggagggc
ctgaacacgttgcgcaatccctcgttcctggcacgacggcagcagcaccttgccttcgag
tcgagcaccgcgctgacggtgccggtcgaggcgggaacggaagcgggcatcgtcgcattc
cagaacgaacgccattggtacttcctgggtgtgcgtcgtgccggtgccggtctcgaactg
ttcctgcaacgaagcagcgacggcaaggccagcatcgtcgccacgaaggccatcgcgaac
gcgaagacactgaaactgaagatcaccggcgacagcggtgcctactcgttcggcttcgat
gccgacggcaagggttggcaatggctgcgccgcaatgaagacggaaccatcctcagcacc
gatgtcgccggcgggttcgtcggcgcggtcgtggggccctatgcgcgtacggagacgaac
aaatga
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