Lysobacter arenosi: HIV01_011450
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Entry
HIV01_011450 CDS
T07237
Symbol
pgaA
Name
(GenBank) poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA
KO
K11935
biofilm PGA synthesis protein PgaA
Organism
lare
Lysobacter arenosi
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PgaA_barrel
TPR_2
TPR_19
TPR_14
TPR_16
Motif
Other DBs
NCBI-ProteinID:
QSX73847
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Position
complement(2459712..2461784)
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AA seq
690 aa
AA seq
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MGEGHRPAMPSASPAVLRGWLLGTGLVLAITTPCFAQSGGAAQTRQHAQMLFEQGRAALR
AGDRFAALRNFAQARSLVPGNADYGRAVADVLVELNAPQGAAQALGADKDIGIRSRQAAA
EVRWGSQVPSLDRTHPYADTDAAIAHLQSLITEAGEATPVDDGLLLRLRRDLVVALRDRG
RWDDALALACQLRASAGSLPPYVRIAEADALLGARRPDEAQQAYQEVLVALPNSRDARIG
LFFAQVESEDFDAAFANVDSLASEGTAWRVVGTGPPARPNEDWLDSQILAAQARRFADMP
ADAWRRINPLADAAPGSAYLRLERGETAAARGWSRLAHEEILIAKSLAPEDFTIDLALAD
SQFRRRDWRGSEQRAENLARIDPVNSHLQQLLDDQAAHRSAELIAELAPRTAEGGSDVAP
GDGLTAAVRVYTPPIRERWRLLAAGERETSKPEDVRLERNRYGAGIEGRWPDVTFELTGW
ANTGMLDHAGADASLQWQPDDHWTLGASLQAFSMETPLRAVEAGIRADAAGISTGYAWNE
SRIASVGLTAMDFTDGNDRLQLNADFGATVVDTPKLDVVLRPSLSLSRNTLRDTPYFNPE
RDASLMVAAELWHILWREYERSLSQRLIINAGGYWQRDFGQDVIGDITYEHFYRHDPRTE
WNYGISWSRRLYDGDAERLLTAFVRLRQRF
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgggcgagggtcatcggccggcaatgcctagtgcctcgccagccgtattgcgtggctgg
ttattggggactggactggtcctggcgatcacgactccgtgtttcgcccagtcgggcggg
gccgcgcaaacacgccagcatgcacagatgctgttcgagcagggtcgagccgcactgcgc
gctggcgatcgcttcgcggcgttgcgcaatttcgcccaggcacgctccctggttccaggc
aacgcagactacgggcgcgcagtcgctgatgtcctggtcgaactcaatgccccgcagggc
gcggcgcaggcgctcggtgccgacaaggacatcggcatccgcagccgccaggctgccgcc
gaagtccggtggggtagccaggtcccatcgctggaccggacgcacccttatgcggacacg
gacgcggccatcgcccacctgcaatcactgatcaccgaagcgggcgaggcaacgccggtc
gacgacggcctgctgctgcgccttcgtcgcgacctggtggttgcactgcgcgatcgcggt
cgctgggatgacgcgctggcgctggcctgccagttgcgggcgagcgctggctccctgcca
ccgtatgtgcgcatcgccgaagctgatgccctgcttggtgcacgtcgaccggacgaggcg
cagcaggcataccaggaggtgctggtggcactgcccaacagccgcgatgcgcgcatcggt
ctgttcttcgcccaggtcgaaagcgaggatttcgacgcggcattcgccaacgtcgattca
ctcgcgagcgaaggcaccgcgtggcgcgtcgtcgggaccggtccgccggcccggccgaac
gaagactggctcgactcgcagatcctggccgcacaggcgcggcggttcgccgacatgccg
gccgacgcctggcggcgcatcaatccgttggccgatgccgcacccgggtcggcctacctg
cgcctggagcgtggagagactgcagcggcacgaggctggtcgcgccttgcgcacgaagag
atcctgattgccaagagccttgccccggaggacttcaccatcgatctggcactggccgat
tcgcagttccgcaggcgcgattggcgcgggtcggagcagcgagccgagaacctggcaagg
atcgatccggtcaacagccacctgcagcagctgctggacgaccaggctgctcatcgcagt
gccgagctcatcgccgaacttgcgccgcggacggccgaaggcggcagcgatgtagcgccc
ggcgacggattgacggccgccgtgcgcgtctacacgccgcccatccgcgaacgctggcgc
ctgctcgccgccggcgaacgcgaaaccagcaaaccggaagacgtcaggctggagcgcaac
cgctacggcgccggcatcgagggccgttggccagatgtcactttcgaactgaccggctgg
gccaacaccggcatgctggaccatgccggtgccgacgcgagcctgcaatggcagcccgac
gatcactggacactcggtgccagccttcaggccttctcgatggagacgccgctgcgcgcc
gtcgaggccggcattcgcgcggatgccgccggaatttcgactggttatgcctggaacgaa
tcgcggatcgcatcggtggggctgaccgccatggatttcaccgacggcaacgatcggctt
cagctcaatgccgacttcggcgccacggtggtcgacacgccaaagctcgatgtcgtcctg
cggccatcgctttcgctatcgcgcaacacgctgcgcgacacgccttacttcaatcctgag
cgggacgcttcgttgatggttgccgccgagttgtggcacatcctgtggagggagtacgag
cgcagcctgtcgcaacggctgatcatcaacgccggcggctactggcagcgcgacttcggc
caggatgtcattggcgacatcacctacgaacacttctatcgccacgatccgcgcacggag
tggaactacggcatctcctggtcgcggcgactctacgacggcgacgcggagcgtttgttg
acggcgttcgtgcgcctgaggcagaggttctga
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