Lysobacter arenosi: HIV01_012765
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Entry
HIV01_012765 CDS
T07237
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lare
Lysobacter arenosi
Pathway
lare03420
Nucleotide excision repair
lare03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lare00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HIV01_012765 (uvrD)
03430 Mismatch repair
HIV01_012765 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lare03400
]
HIV01_012765 (uvrD)
Enzymes [BR:
lare01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HIV01_012765 (uvrD)
DNA repair and recombination proteins [BR:
lare03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HIV01_012765 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
HIV01_012765 (uvrD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_12
DUF3553
Motif
Other DBs
NCBI-ProteinID:
QSX74081
UniProt:
A0ABX7RAR4
LinkDB
All DBs
Position
complement(2766814..2768994)
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AA seq
726 aa
AA seq
DB search
MDVSHLLDALNPAQREAVSAPPGHYLVLAGAGSGKTRVLTHRIAWLNEVHGVPTHGILAV
TFTNKAAGEMRARVDGQLRNGARGMWIGTFHGLAHRLLRLHWQEAKLPEGFQVLDSDDQL
RLVKRVVQGLEIDEARFPPRQIAWWINAQKDEGKRPQNIQPAGNDPWADVMLKSYEAYQE
RCERAGLVDFAELLLRAHELLRDNPALLAHYRHRFREILVDEFQDTNAIQYAFVRVLAGD
SGHVFVVGDDDQSIYGWRGAKVENMQRFLKDFPGTQTIRLEQNYRSSANILEAANAVIAH
NPDRLGKNLWTDSGTGEPIDLYAAYNEMDEARFAVERLRQWVRDGGSFGEVAVLYRSNAQ
SRAFEEALLSEQVPYRVYGGQRFFERAEIKDTLAYLRLIASRLDDAAFERAVNTPTRGIG
ERTLDEIRRRARTDAVALWEAARRTVSENGLTARARNAIAGFLALIDDIDTEVQPMTLPE
KIDHVLIRSGLRDHYFNESRGQLDSRVDNLDELVSVASRFSRTDEEDAAAMPELVAFLSY
AALEAGEGQAQAGEEGVQLMTLHSAKGLEFPLVFLAGMEEGVFPSGRSTEESGRLEEERR
LAYVGITRARQKLVLSYAETRRIHGADMYGVPSRFLREIPPALLHEVRPKVQVSRPMYNS
QPRRDMGHAAIEAPPIKLGAMVRHPSFGTGTVTDYEGAGAHARVQVNFDDAGSKWLVLAY
ANLQPA
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggatgtctcccacctgctcgacgcgctgaatccagcgcagcgcgaggccgtcagcgcc
ccgcccggtcactatctggtcctcgccggcgctggctccggcaagacccgcgtgctcact
catcgcatcgcctggctcaacgaagtccacggcgtgcccacccacggcatcctggcggtg
acgttcaccaacaaggccgccggcgagatgcgcgcgcgcgtcgacgggcagctgcgcaat
ggcgcccgtggcatgtggatcggcaccttccacggcctggcccaccgcctgctgcgcctg
cactggcaggaagccaagctgcccgagggcttccaggtgctcgactcggacgaccagctg
cgcctggtcaagcgcgtcgtgcagggcctggagatcgacgaggcccgcttcccgccgcgc
cagatcgcctggtggatcaacgcgcagaaggacgagggcaagcgcccgcagaacatccag
ccggccggcaacgatccgtgggccgacgtgatgctcaagtcctacgaggcgtaccaggag
cgctgcgaacgtgccggcctggtcgacttcgccgagctgctgctgcgcgcgcacgaactg
ctgcgcgacaacccggcgctgctggcgcactaccgccaccgcttccgcgaaatcctggtc
gacgagttccaggacaccaacgcgatccagtacgccttcgtgcgcgtgctcgccggcgac
agcggccacgtgttcgtggtcggcgacgacgaccagtcgatctacggctggcgcggcgcc
aaggtcgagaacatgcagcggttcctgaaggacttcccaggaacccagaccatccgcctg
gagcagaactaccgctccagcgccaacatcctggaagcggccaacgccgtcatcgcccac
aaccccgaccgcctcggcaagaacctgtggaccgacagcggcaccggtgagccgatcgat
ctgtacgcggcctacaacgagatggacgaggcgcgcttcgcggtcgagcgcctgcgccag
tgggtgcgcgacggtggcagcttcggcgaagtcgccgtgctctatcgcagcaatgcgcag
tcgcgcgccttcgaagaagcattgctttcggagcaggtgccgtaccgcgtctacggcggc
cagcgcttcttcgagcgcgccgaaatcaaggacaccctggcctacctgcgcctgatcgcc
tcgcgcctggacgatgccgccttcgaacgcgcggtcaacacgcccacgcgcggcatcggc
gagcgcacgctcgacgagattcgccgtcgcgcccgcaccgacgcggtcgcactgtgggaa
gcggcgcggcgcacggtcagcgagaacggcctgaccgcgagggcgcgcaacgcgattgcc
ggtttcctcgccctgatcgacgacatcgacaccgaagtgcagccgatgacgctgccggaa
aagatcgaccacgtcctgatccgctcgggcctgcgcgaccactacttcaacgaatcgcgc
ggccagctcgactcgcgcgtcgacaacctcgacgaactggtgtcggtggcttcgcgcttc
tcccgcaccgacgaggaagacgccgcggcgatgccggaactggtcgccttcctcagctac
gccgcgctcgaggccggcgaaggccaggcccaggccggcgaggaaggcgtgcagctgatg
acgctgcacagcgccaaaggcctggagttcccgctggtgttcctggcgggcatggaagag
ggcgtgttcccgagcggacgctcgaccgaggagtcaggacgtctcgaggaagagcgccgc
ctggcctacgtcggcatcacccgcgcgcgccagaagctggtgctgagctacgccgagacg
cgccgcatccacggcgccgacatgtacggcgtgccgtcgcgcttcctgcgcgaaattccg
ccggcgctgctgcacgaggtgcggccgaaggtgcaggtgtcgcggccgatgtacaactcg
cagccgcgccgcgacatgggccacgccgcgatcgaggcgccgccgatcaagctcggcgcg
atggtgcgccatcccagcttcggcacgggcacggtcaccgattacgaaggcgccggcgcg
cacgcgcgcgtgcaggtcaacttcgacgatgccggcagcaagtggctggtgctggcgtac
gcgaacctgcagccggcgtga
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