Lysobacter arenosi: HIV01_016890
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Entry
HIV01_016890 CDS
T07237
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
lare
Lysobacter arenosi
Pathway
lare00730
Thiamine metabolism
lare01100
Metabolic pathways
lare01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
lare00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
HIV01_016890 (thiC)
Enzymes [BR:
lare01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
HIV01_016890 (thiC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
DUF5817_CT
Motif
Other DBs
NCBI-ProteinID:
QSX74807
LinkDB
All DBs
Position
3681200..3683077
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AA seq
625 aa
AA seq
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MNAVPSELVRQAEQLSADVTRPIPGSHKIHVEGSRPDIRVPMREIALARTPTMFGGEDNA
PLAVYDTSGAYTDSSATIDLAQGLAPLRAQWIAERGDTEALTGLSSEFGRKREHDPKLDA
VRFGNRPLPRRAIAGANVTQMHYARRGIITPEMEFIAIRENQRLESIREAHLLRQHAGET
FGANIQKIITPEFVRDEVARGRAIIPNNINHPESEPMIIGRNFLTKVNANIGNSAVSSGI
AEEVEKLVWSMRWGADTVMDLSTGKHIHETREWIIRNSPVPIGTVPIYQALEKVDGRAEE
LTWEIFRDTLIEQAEQGVDYFTIHAGVLLRYVPLTAKRVTGIVSRGGSILAKWCLAHHKE
NFLYTHFEDICEIMKAYDVAFSLGDGLRPGSIADANDAAQFGELETLGELTKIAWKHDVQ
TMIEGPGHVPMQLIKENMDKQLRECGEAPFYTLGPLTTDIAPGYDHITSAIGAAMIGWFG
TAMLCYVTPKEHLGLPNKHDVREGLMAYKIAAHAADLAKGHPGAQARDNAMSKARFEFRW
EDQFNLGLDPERAREYHDETLPKDAHKVAHFCSMCGPHFCSMKITQDVRDYAKEHGVDEQ
AALDEGMAEKSAEFLAQGAQVYHKA
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcagtcccctccgaacttgtccgccaggctgagcagctgtcggccgacgttacc
cgcccgattccgggctcgcacaagatccacgtcgaagggtcgcgtccggacatccgcgtg
ccgatgcgcgagatcgcgctggcgcgcacgccgaccatgttcggcggcgaggacaatgcg
ccgctggcggtctacgacacctccggtgcctacaccgacagcagcgcgacgatcgacctg
gcccagggcctcgcgccgctgcgcgcgcaatggatcgccgagcgcggcgacaccgaagcg
ctcaccgggctgtcgtcggagttcggccgcaagcgcgagcacgatcccaagctcgatgcg
gtgcgcttcggcaaccgtccgctgccgcgccgcgcgatcgccggcgccaacgtcacccag
atgcactacgcccgccgcggcatcatcaccccggagatggagttcatcgcgatccgcgag
aaccagcgcctggagtcgatccgcgaggcgcacctgctgcgccagcacgccggcgaaacc
ttcggcgccaacatccagaagatcatcacgcccgagttcgtgcgcgacgaagtcgcccgc
ggtcgcgccatcatccccaacaacatcaaccaccccgaaagcgagccgatgatcatcggc
cgcaacttcctgaccaaggtcaacgccaacatcggcaacagtgcggtgtcctcgggcatt
gccgaggaagtggagaagctggtctggtcgatgcgctggggcgccgacacggtcatggac
ctgtcgaccggcaagcacatccatgaaacgcgcgagtggatcatccgcaactcgccggtg
ccgatcggcaccgtgccgatctaccaggcgctggagaaggtcgacggccgcgccgaagag
ctgacctgggagatcttccgcgacaccctgatcgaacaggcagagcagggcgtggactac
ttcaccatccacgccggcgtgctgctgcgctacgtgccgctgaccgccaagcgcgtcacc
ggcatcgtctcgcgcggcggttcgatcctggccaagtggtgcctggcgcaccacaaggag
aatttcctctacacgcacttcgaggacatctgcgagatcatgaaggcctacgacgtggcc
ttctcgctcggcgatggcctgcgcccgggctcgatcgccgatgccaacgatgccgcccag
ttcggcgagctcgagacgctcggcgagctgaccaagatcgcgtggaagcatgacgtccag
accatgatcgaaggccccggccacgtgccgatgcagctgatcaaggagaacatggacaag
cagctgcgcgagtgcggcgaagcgccgttctacacgctggggccgctgaccaccgacatc
gcgccgggttacgaccacatcaccagcgcgattggcgctgcgatgatcggctggttcggc
acggcgatgctctgctacgtcacgccgaaggagcacctgggcctgcccaacaagcacgac
gtgcgcgaaggcctgatggcctacaagatcgccgcgcacgcggccgacctcgccaaggga
cacccgggcgcgcaggcgcgcgacaacgccatgagcaaggcgcgcttcgagttccgctgg
gaggaccagttcaacctcggcctcgatccggagcgtgcgcgcgagtaccacgacgagacg
ctgcccaaggacgcccacaaggtcgcccacttctgctcgatgtgcggcccgcacttctgc
tcgatgaagatcacccaggacgtgcgcgactacgccaaggaacacggcgtcgacgaacag
gccgcgctggacgaaggcatggccgagaagtcggccgaattcctcgcccagggcgcgcag
gtctaccacaaggcctga
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