Lactiplantibacillus argentoratensis: LPA65_02135
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Entry
LPA65_02135 CDS
T07625
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
larg
Lactiplantibacillus argentoratensis
Pathway
larg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
larg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LPA65_02135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
larg03021
]
LPA65_02135
03019 Messenger RNA biogenesis [BR:
larg03019
]
LPA65_02135
Transcription machinery [BR:
larg03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
LPA65_02135
Messenger RNA biogenesis [BR:
larg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LPA65_02135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
AAA_22
NACHT
S1CSD-TOTE-2
AAA
ATPase_2
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
AYJ34649
UniProt:
A0AAN1UH80
LinkDB
All DBs
Position
456617..457909
Genome browser
AA seq
430 aa
AA seq
DB search
MEKILTMHDLEQKTLKEIYNYAREYKISYYSQMNKKELSLAVLREQDKKRGFVQMEGVLE
IISQEGYGFLRPINYGPSQEDIYISQSQIHRFGLRNGDYVAGQARPPRPNERYYGLMRVG
TVNGKDPNEAKQRPHFPALTPLYPQKQIKLSTTAAVLATRLIDTFVPIGFGQRGLIVAPP
KAGKTTLLKNIANGIVANYPDAKLIMLLIDERPEEVTDLERSIKGEVVSSTFDQQPQNHV
RVAELVLERARRLVEDKQDVIILLDSITRLTRAYNLVIPSSGRTLSGGVDPTAFYKPKRF
FGSARNIEEGGSLTILGTALVDTGSRMDDMIYEEFKGTGNSELQLSRELAERRVFPALDL
KQSSTRKEELLVSRKNLEPVWQIRRSMTGNALEYTEQLLQFLKHTKTNTEFVRDLASLKF
TGQSTRRPRR
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaattttaacaatgcacgatctcgagcagaaaacgttaaaagaaatttataac
tatgctcgtgagtataaaatttcttattattcgcaaatgaataagaaggaactctcatta
gccgttctccgtgagcaggataaaaagcggggctttgtacaaatggaaggcgtcttggaa
attattagccaagagggctatggctttttgcggccaattaattatgggccttcgcaggaa
gatatttatatttctcagtcgcagattcatcgctttggtcttcgtaacggagactatgtg
gctggtcaagcccggccaccgcgacctaacgaacggtattacggtttaatgcgggtaggg
acagttaacggtaaggatcctaatgaggccaagcaacggccccattttccagcgttaaca
ccactttatccacaaaaacaaattaagttatcgacaacggctgccgttttagcgacccgt
ttgattgatacttttgtcccgattggcttcggtcagcggggcttaattgtcgcacctcct
aaagccggtaagacgacgctgttaaagaatattgcaaatggcatcgtcgccaattatcca
gacgctaagctgattatgttactgattgatgaacggcccgaagaagtgactgatttagag
cggtcaatcaagggagaagtggtgagttctacttttgatcaacaaccacaaaatcacgtg
cgtgttgcggaattagtgcttgaacgtgcgcggcgcttagttgaagacaaacaggatgtg
attatcttattggattcgattacccggcttacgcgggcatataatttggtcatcccatct
agcgggcggacgttgtctggtggggtcgatcccacggcgttttacaagcccaagcggttc
ttcggttccgcgcgcaatatcgaggaaggtggtagcctaacgattttaggcaccgcgtta
gtcgatacgggtagccggatggacgacatgatttatgaagaattcaaaggaactggcaac
tcagaattacagctatcccgcgagttagctgaacggcgggtcttcccggcgctagatttg
aagcaatccagtacgcgtaaagaggaattgttggttagtcgtaagaatttggagccagtc
tggcagattcgtcgatcaatgactggcaacgcgttagagtacaccgaacagctcttacaa
tttttaaaacacacgaagaccaacactgagtttgttcgtgatctagccagcttaaagttc
actggtcaatcaacccggcggccgcgtcgttaa
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